Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02354 ATGGCAGAGAAAATTTGTGAAGGTGCTGCTGAGTCTCCAACTACCCCAGTTGGAAGACAGGCACCAGAGGGTCAAAGAGTGAAAGCCACGAGGCACCCTCGATGGACAAGACAAGAAACGCTCGTTCTCATAGAGTCCAAGAAAATGGTAGAAAATGGAGAACAAATTTGCAGGTTCAGATCAGCCTCGGGGTTCGTTCAAAGCGACCCCAAATGGGACATGGTGTCAACGTTGTGTCAGCAGCGTGGCGTGAAGAGAGGGGCAGTTCAGTGCAGGAAAAGGTGGGGCAATCTCCTCACTGATTTCAGGAAGATCAAGAAGTGGGAGTCAAGTATAAGGGAAGAGAGTGAGTCCTTTTGGATCATGAGAAATGACGTGAGGAAGGAAAAGAAGCTTCCGGGGTTCTTTGATTCGGTGGTGTATAACGTGTTGGATGGAGGGGTGTGTACCACTGTTGCATTTCCCTTGACACTGGTTAAGATGGTGCCGAAAGTGGAGAATGGTGTGGAGGGAGTGGCTCTGCCTCCGGAGCAGTATAATAaggagaatgaggatgaggaggtggaggaggaggaggaagatgaggCCATTGTTGATAGTGAGAAAATGAGTTGGAGCACTGAGGAGGAACACATGGAGACAAATGTAACTGGGAATATGATTAATGGTTTTTTGAAGACACATGGTTCTAAGGACAAAGGCACACCTGGGAGTCTAAAAAAGATCATGCCCATGCTCACATTTCCTACTCCAGCAGATAAACAGCAGCAGCCATCTTGCCAAGGGAACTACGATCCAGGGCCCCCACCTCCAGGCTATCAGAGAGAACCAATGTTCCAGGAGGGATACAAGAGAAAGCGGTTATCATCGGACAGTAGCGAGGACAGCACAGATTTCAACAACAGTATTGCCAAATTACTAAGAAGGAATAGTGATATACTAAAAGCCCACCTTGGAGCTCAGAACATAAATCACCAATTGGCCAGGGATCAGCAGAAGCAGCAAACTGACATCTTAGTTGCAGCCCTTGGAAAGCTCACAGATGCTCTTACAAAAATTGCTGACAAGCTGTAA 1074 0.4525 MAEKICEGAAESPTTPVGRQAPEGQRVKATRHPRWTRQETLVLIESKKMVENGEQICRFRSASGFVQSDPKWDMVSTLCQQRGVKRGAVQCRKRWGNLLTDFRKIKKWESSIREESESFWIMRNDVRKEKKLPGFFDSVVYNVLDGGVCTTVAFPLTLVKMVPKVENGVEGVALPPEQYNKENEDEEVEEEEEDEAIVDSEKMSWSTEEEHMETNVTGNMINGFLKTHGSKDKGTPGSLKKIMPMLTFPTPADKQQQPSCQGNYDPGPPPPGYQREPMFQEGYKRKRLSSDSSEDSTDFNNSIAKLLRRNSDILKAHLGAQNINHQLARDQQKQQTDILVAALGKLTDALTKIADKL 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02354 357 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 19 357 - -
Cca09g02354 357 MobiDBLite consensus disorder prediction 177 206 - -
Cca09g02354 357 MobiDBLite consensus disorder prediction 249 277 - -
Cca09g02354 357 MobiDBLite consensus disorder prediction 1 31 - -
Cca09g02354 357 Pfam Myb/SANT-like DNA-binding domain 33 122 IPR044822 -
Cca09g02354 357 Gene3D - 35 104 - -
Cca09g02354 357 ProSiteProfiles Myb-like domain profile. 34 99 IPR001005 -
Cca09g02354 357 MobiDBLite consensus disorder prediction 182 198 - -
Cca09g02354 357 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 19 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02354 Cca-Chr9 48872763 48875432 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02354 - - gmx:100793052 520.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02354 09 48872763 48875432 Cca09g02354 09 48872763 48875432 ECH