Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02264 ATGGGTGCATGCAGAGCACCCATTTGCCATCTTCCCCTGTGGAAGCCCAAAACCAGAATCCAGAATTCTCAGAGCAAAGCATCAACACCACCACCTATTTTTAGAAACAGGCGCTTATTCCTCTTCTCTCTGCCCCTCTCTAGTTTCCTTCTCCTTCCTGTTCCTAGCTTTGGTGATGGATCTTCTTCATATGCTGCCACAATGTTTGACCCATTAACTGCTTCTGAAAGAGAAGCAAGTGCTTTAGTTTCACAGAGAGTGTCTCAAGCAGTGGAGTTGCTGGAGAAAGGGAGGGAATTGCAGGCTCAGGGTGACTTTGGTGGTGCTCTTCAATACTTTTCTCAGGTTATTGAAAGCTACAAAGACTTGGCATTCTCAGAGTATGCAAGGGTAGGAAGAGCATTGGCCCTATATGAAGTTGGTGATAGAGAAGAAGCAATAGCTGAGATGGAAGACGTTTCAATATCTTTAAAAGGGTATCCAGAAATACATGCAGCTCTTGCAGCAGCCTTATATGAAGATAAGCACGCTGCTTTGCTTGCTGAAAACCAGTTTGCCATTGCAACTCTGCTTGATCCCCATTTTACAGACCTTTCGTATGTTAGAGACACAAAGCACTGGCCTCCAAGTTTGGTCAGTTCTCTGCAGCACTTCATCACACTATCTTAA 669 0.4469 MGACRAPICHLPLWKPKTRIQNSQSKASTPPPIFRNRRLFLFSLPLSSFLLLPVPSFGDGSSSYAATMFDPLTASEREASALVSQRVSQAVELLEKGRELQAQGDFGGALQYFSQVIESYKDLAFSEYARVGRALALYEVGDREEAIAEMEDVSISLKGYPEIHAALAAALYEDKHAALLAENQFAIATLLDPHFTDLSYVRDTKHWPPSLVSSLQHFITLS 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02264 222 PANTHER EXPRESSED PROTEIN 1 222 - -
Cca09g02264 222 Pfam Tetratricopeptide repeat 102 169 - -
Cca09g02264 222 Gene3D Tetratricopeptide repeat domain 80 202 IPR011990 GO:0005515
Cca09g02264 222 SUPERFAMILY TPR-like 84 197 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02264 - - gmx:100500132 346.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02264 09 47863814 47867342 Cca09g02264 09 47863814 47867342 ECH