Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02256 ATGGTGAGGTTTTTAGGGTTGACTCTTGGCTATGCAGAAGAACCCCGAGAAATAGCGTCAAGGTCTAACCTGACCAGTGAGTCTGGTGAAAATGGGTGGCTCATCAGATTCTTTGACTCGGCGTTCTTCTGCGAGTGGATTGCTGTTAGCTACCTGTACAAGCATGATCATGCTGGGGTGCGTGATTATCTCTGTAATAGAATGTATACTCTTCCTTTGCAAGGTGTTGAGAGTTATTTGTTCCAGATATGTTACATGATGATACATAAGCCTAGTCCGTCCTTGGATAAATATGTGATAGATGTGTGCTCGAAGTCACTTAAGATTGCTTTGAAGGTACATTGGTTCTTGATGGCGGAGCTTGAGGACTCTGATGATAATGAAGGGATTAGGAGTATTCAGGAGAAGTGTCAGTTCGCTGCCACGTTGATGGGTGAGTGGCCACCTCTAATACGGCCTCAAACTGAACCTCCTAGTCCTGGAGGCAAAAGCCAAGTTTTAAATAGGTTACTATCATCGAAAAATCGATTGTTGTCACTAACATCCTCACCGCCTTCTCAAAAGTCTTTATCATTTTCACCTTTCTCTGGAAACAATTTGCAAGAGGATGGCAACCCAGTGTCTCCTGATGAGAACAGGATATTTAAGAAGTTAATGCCAGGTCAGAAGGTTAGGGATGCTTTGCTTTTTCGGAAGTCAGTGGACAAAGATGATGAGGCTTCTGAAAAGGATGGTTTTTTCAAGAGGCTTTTGAGAGATAGCAAAGGTGATGATGAACTGGGCCAAAAAATTCGTGATGCATTACTGTTTAGGAAGTCATCTGTGAAAGACGATGAAGACTCTGAAAAAGATAATTTCTTTAAAAGGTTCTTAAGGGACAGTAGAGGTGACGATGAAGACTCAGAAAAGGATGGTTTCTTTCGGAGACTCTTAAGAGACAGTAGAAGTGAAGATGAAGATGTAGCTTCAAGCTCAGAGGGGTTATTTAAGAGATTGTTTCGTGATAGCAAAAATGATTCTGAGGACAGAATACACACTAAAACAATAGAAGATGAAGATAAAGAGGGTTTTTTCCGAAAGTTTTTTCGGGAGAAATTTGAAGATAGGAAGGATGGGAGTGATAGGAATGAAAACAGAGATGTTGCTAATTTTGAAGAGAAAAATGGCAAACCTGCTGAAGAGGATGAAAAGGAAGGGTTTTTTCGGAAATTATTCAAGGATAAATTTGAGGACAAGAAAGATACAAATGATAAAATTGAAGAGGCTACTACCAATGGTGAGGAAGAAGAGTCTTCTGAGTTTTCCTTGTTCAAAAGACTATTTCGTGTGCACCCTGAAGATGCTAAAAGTAGTCTGGCCAATGAAAACAGCAATAGTGGTGGCTTATTTGAAAGTAGTCCAGGTACAGAGAATTTTTTCCGTAAATTGTTCAGAGACCGTGACCGATCAATTGAAGATTCAGAACTTTTGGGTCCAAAAAGACTGAAAGAGAAGCATCCTGGATCCCCAAAGCAGCAAAGTGAAAAATTAAGCACAAAGCCACCACTACCAATTAGTCCATCTCAGTTCCGGAAAGGGGCTTACCATGACTCATTGGAGTTTGTGCAGTCATTATGTGATACGTCATATGGGTTAGTGGATGTATTTCCTATTGAAGATCGCAAAAGTGCTCTTCGTGAGGCACTAGTAGAAATCAATCTACACGTAGCAGAGGTTCAGAACACTGGAGGAGTTTGTTTTCCATTGGGGAAGGGCATGTATCGTGTGCTTAATATACCTGAAGATGAAGCTGTTCTCTTGAATTCTAGGGAGAAGGCACCTTACCTGATCTGTGTAGAAGTTTTGAGATGTGAAATGCCAAGTAATTCCAAGGAGGCATCCAGTTCTCAGAAACTTTCTCAAGGGGGAATCCCTTTGGCAAATGGAGATGCTCTCTTGCAAAAACCACCCCCTTGGGCTTATCCATTACAGACAGCACAAGAGGTGTACCGCAATAGCAATGATAGGATGTCCAGTTCGACTGCTCACGCAATTGACCAGGCAATGACTCATGTATCTGAGGCAAAAATCAAATTTGTTCGTGTGAATCTTTCCTTGGAAACACAGTTAAATGGTCAGCCAGAGAAGATTGAAGTGGCTGATCTACATAGTGGCAGTCAGCGTTCTGCTTCAATTCATAGAGAGGGTATGTATGAACCAGCAGCAGCAGGATGTGGCAGTGATTTGGAATGGGTTCGAGTAGTTTTGACAGCTGATCCCGGGGTTAGATTGGAAGATATTGAGGATCAAGCACCACCTCGGAGGAAGGAACATCGCCGTGTTCCAAGTACGGTGGCAATAGAGGAAGTAAAGGCTGCGGCAGCAAAAGGGGAAGCACCTCTTGGACTCCCTTTGAAAGGTGCTGGTCAAGATTCATCCGATGCGCAACCAAGGGCTAATGGAATTACTCCCAAAGCCAGTGATGCCTTGTCTGGTGAACTTTGGGAGGCAAAGAAGGATAGGATATGCAAGGCTTCCATATATGGGAAGTTACCTGGTTGGGACTTGAGATCTGTTATTGTAAAGAGTGGTGATGATTGCAGGCAGGAGCATCTGGCTGTTCAACTTATTTCTCACTTCTATGATATTTTCCAAGAAGCTGGTCTACCCCTCTGGCTGCGCCCGTATGAAGTTTTATGTACTTCTTCGTATACAGCTCTTATTGAAACAATTCCAGATACGGCTTCTATACACTCTATCAAAAGTAGATATCCCAACATCTCAAGTTTACGTGAATTCTTCAATGCTAAGTATCAAGAAAATTCTCCCAGTTTTAAACTGGCCCAGAGAAACTTTGTTGAAAGTATGGCAGGATATTCCCTGGTGTGCTACTTTCTGCAGGTGAAGGATAGGCATAATGGGAACCTCCTATTGGATGAAGAAGGTCATATCATACATATTGATTTTGGTTTCATGCTTTCCAATTCACCTGGTGGTGTTAACTTTGAAAGTGCACCTTTCAAATTAACACGTGAGCTTCTTGAGGTTATGGATTCCGATGCTGAGGGTGTTCCAAGTGAGTTCTTTGATTATTTTAAGGTTTTATGCATTCAAGGCTTCCTTACTTGCCGCAAGCATGCTGAGCGCATCATTCTTCTTGTTGAGATGTTGCAGGATTCAGGTTTCCCATGCTTTAAAGGCGGTGCTCGGACAATACAGAACCTACGAAAGCGATTCCATCTCAGTTTAACTGAAGAGGTTTCAATATTAATAATATTACCTATTTAA 3267 0.4203 MVRFLGLTLGYAEEPREIASRSNLTSESGENGWLIRFFDSAFFCEWIAVSYLYKHDHAGVRDYLCNRMYTLPLQGVESYLFQICYMMIHKPSPSLDKYVIDVCSKSLKIALKVHWFLMAELEDSDDNEGIRSIQEKCQFAATLMGEWPPLIRPQTEPPSPGGKSQVLNRLLSSKNRLLSLTSSPPSQKSLSFSPFSGNNLQEDGNPVSPDENRIFKKLMPGQKVRDALLFRKSVDKDDEASEKDGFFKRLLRDSKGDDELGQKIRDALLFRKSSVKDDEDSEKDNFFKRFLRDSRGDDEDSEKDGFFRRLLRDSRSEDEDVASSSEGLFKRLFRDSKNDSEDRIHTKTIEDEDKEGFFRKFFREKFEDRKDGSDRNENRDVANFEEKNGKPAEEDEKEGFFRKLFKDKFEDKKDTNDKIEEATTNGEEEESSEFSLFKRLFRVHPEDAKSSLANENSNSGGLFESSPGTENFFRKLFRDRDRSIEDSELLGPKRLKEKHPGSPKQQSEKLSTKPPLPISPSQFRKGAYHDSLEFVQSLCDTSYGLVDVFPIEDRKSALREALVEINLHVAEVQNTGGVCFPLGKGMYRVLNIPEDEAVLLNSREKAPYLICVEVLRCEMPSNSKEASSSQKLSQGGIPLANGDALLQKPPPWAYPLQTAQEVYRNSNDRMSSSTAHAIDQAMTHVSEAKIKFVRVNLSLETQLNGQPEKIEVADLHSGSQRSASIHREGMYEPAAAGCGSDLEWVRVVLTADPGVRLEDIEDQAPPRRKEHRRVPSTVAIEEVKAAAAKGEAPLGLPLKGAGQDSSDAQPRANGITPKASDALSGELWEAKKDRICKASIYGKLPGWDLRSVIVKSGDDCRQEHLAVQLISHFYDIFQEAGLPLWLRPYEVLCTSSYTALIETIPDTASIHSIKSRYPNISSLREFFNAKYQENSPSFKLAQRNFVESMAGYSLVCYFLQVKDRHNGNLLLDEEGHIIHIDFGFMLSNSPGGVNFESAPFKLTRELLEVMDSDAEGVPSEFFDYFKVLCIQGFLTCRKHAERIILLVEMLQDSGFPCFKGGARTIQNLRKRFHLSLTEEVSILIILPI 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02256 1088 CDD PI4Kc_III_beta 820 1079 - -
Cca09g02256 1088 Gene3D - 765 904 - -
Cca09g02256 1088 MobiDBLite consensus disorder prediction 369 399 - -
Cca09g02256 1088 PANTHER BNAA02G34040D PROTEIN 11 258 - -
Cca09g02256 1088 MobiDBLite consensus disorder prediction 180 206 - -
Cca09g02256 1088 Pfam Phosphatidylinositol 3- and 4-kinase 851 917 IPR000403 -
Cca09g02256 1088 Pfam Phosphatidylinositol 3- and 4-kinase 920 1058 IPR000403 -
Cca09g02256 1088 PANTHER PHOSPHATIDYLINOSITOL KINASE 11 258 IPR015433 GO:0046854|GO:0048015
Cca09g02256 1088 ProSiteProfiles PIK helical domain profile. 1 140 IPR001263 -
Cca09g02256 1088 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 1. 854 868 IPR018936 GO:0016301
Cca09g02256 1088 PANTHER BNAA02G34040D PROTEIN 324 1086 - -
Cca09g02256 1088 MobiDBLite consensus disorder prediction 180 212 - -
Cca09g02256 1088 SUPERFAMILY Protein kinase-like (PK-like) 556 1081 IPR011009 -
Cca09g02256 1088 MobiDBLite consensus disorder prediction 488 504 - -
Cca09g02256 1088 PANTHER BNAA02G34040D PROTEIN 262 331 - -
Cca09g02256 1088 MobiDBLite consensus disorder prediction 794 818 - -
Cca09g02256 1088 PANTHER PHOSPHATIDYLINOSITOL KINASE 324 1086 IPR015433 GO:0046854|GO:0048015
Cca09g02256 1088 SUPERFAMILY ARM repeat 54 126 IPR016024 -
Cca09g02256 1088 MobiDBLite consensus disorder prediction 488 522 - -
Cca09g02256 1088 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 829 1088 IPR000403 -
Cca09g02256 1088 PANTHER PHOSPHATIDYLINOSITOL KINASE 262 331 IPR015433 GO:0046854|GO:0048015
Cca09g02256 1088 SMART pi3k_hr1_6 851 1086 IPR000403 -
Cca09g02256 1088 Gene3D - 905 1085 IPR036940 GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02256 Cca-Chr9 47784758 47800596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02256 1 1079 Lipid Metabolism Gene Families AT5G09350 68.773 0.0 1515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02256 K19801 - gmx:100784942 1947.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02256 09 47784758 47800596 Cca09g02256 09 47784758 47800596 ECH