Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02255 ATGGAGCTAGAACAACCCTTCATATTAGCCCAACCATGCATGGATCAAAGCCAAGGCAAAACCAACAACGAGGTCGGAGTGTTATCCAAACCAAGCACATCACAAACATCTCATGACTTTTGCAACCACTCCGAGTCCTTCAAGAACCTCGTAGAGATGGGCCTGCCCTGTAATGAATCAGTGGAGGAAAAGCTTTGTTGGTTACGGTCCCAAATCATAGGCAACGATGCAGAGTTCGATTCTCCATTTGGAAAACGTAAAGCTGTCTATGCTGATCACACAGCTTCAGGCCGCAGCCTTCACTACATCGAAAACTTCATCATCAATCACCTTCTTCCTTTCTATGGTAACACGCATACGTGCGACAGTTACGTGGGAAGCAGGACAACAAAAATGGTACACGAAGCAAATGAGTACATAACAAAATGTTTAGGTGGTGGGAAAGATGATGCACTCATATTATGTGGTTCAGGCACAACTGCAGCCATCAAGAGGCTGCAAGAAGTGATGGGAATCGCTGTGCCCTCTATTTTGAGGGAAAGGGTTTTGCAGAACCTTGGCACAGAAGAAAGATGGGTGGTTTTTGTTGGACCCCATGAACACCACTCAAACCTCCTTTCTTGGAGGCAAAGTTTGGCTGAGGTGGTAGAGATTGGTCTTGATGATAAAGGGTTGCTTGACATGAATGCTCTAAGGCTACAACTTGAGAGCTACAAAGATACCAAGCGACCTATGTTGGGATCTTTCTCAGCTTGTAGCAATGTCACTGGGATCCACTTAGATACACGTGCAGTTGCTCAGCTTCTTCATAAGTACAAAGCCTTTGCATGCTTTGATTTCGCAGCCAGTGGTCCTTACGTGGAGATTGACATGAGGTCGGGGAAGAGTGATGGTTATGATGGTGTGTTCCTAAGTCCACATAAGTTTCTTGGTGGTCCTGACTCTCCTGGGGTGCTCCTCATGAACAAGGCCCTGTACCTGCTAGGATCTTCACCACCCTCCACTTGTGGAGGTGGAACTGTGACCTATGTCAATGGCTTCAATGAACAGGATACATTATACTTGGAGAACATAGAGGAAAGGGAAACTGGGGGCACGCCTCCAATAATCCAGACGGTGAGAGCAGCATTGGCATTTTGGGTGAAAGAGTACATAACATGTGAAGTGATTGAAAAACGAGAACAAATGTACATTAACAAGGCACTTGACAAGCTTAGCTCAAACCCGAACATTGAGGTTCTAGGAAACTTGAAGGCCAAGAGACAAGCTATATTATCATTTCTGATATACTCTACCACCAATTCTTCCTCATTAGCTAGTGAGTGGAGTGATGGTAACCAGGAAAATGAAGGGGAACTTGATTTGTGGGCAGAAACGGGGAACCAAAGAGGTAAGCCACTTCATGGCCCTTTTGTTGCAACGTTGCTCAATGACCTCTTTGGGATCCAAGCTCGAGGTGGATGTGCTTGTGCCGGACCTTATGGCCATGAATTGCTCCACATCAACAAGTCTCAATCACTTGCCATTAGATCAGCAGTTCAAGAGGGCTATATTGGAGTAAAGCCAGGGTGGACCCGAGTTAGTTTTCCTTACTACATGAGTGAAGAGGATTTTGAGTACATTCAGAAAGCCATAGAGTTTTTGGCTGTGTATGGCCAACGATTCATTCCTCTTTATAGCTTCAATTTGATGAATGGGAGCTGGAGATTGAAGACAGAGAAATTCGAGGCACTAACCAAGGAAAGCAATTGCAACTTTCCTAGTCATGATATTGGAGTTAAGGTGACGAGAAGGGATGAATCATACTTTGATGCGGCTAAGTGTATTGCTAGTAGCCTCCCTAAATTCCCTTCTCAAAATATATTCCAGGGGAACGTGGATCCCAATATATTCGGCTTTAGAGTTTAA 1908 0.4486 MELEQPFILAQPCMDQSQGKTNNEVGVLSKPSTSQTSHDFCNHSESFKNLVEMGLPCNESVEEKLCWLRSQIIGNDAEFDSPFGKRKAVYADHTASGRSLHYIENFIINHLLPFYGNTHTCDSYVGSRTTKMVHEANEYITKCLGGGKDDALILCGSGTTAAIKRLQEVMGIAVPSILRERVLQNLGTEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDKGLLDMNALRLQLESYKDTKRPMLGSFSACSNVTGIHLDTRAVAQLLHKYKAFACFDFAASGPYVEIDMRSGKSDGYDGVFLSPHKFLGGPDSPGVLLMNKALYLLGSSPPSTCGGGTVTYVNGFNEQDTLYLENIEERETGGTPPIIQTVRAALAFWVKEYITCEVIEKREQMYINKALDKLSSNPNIEVLGNLKAKRQAILSFLIYSTTNSSSLASEWSDGNQENEGELDLWAETGNQRGKPLHGPFVATLLNDLFGIQARGGCACAGPYGHELLHINKSQSLAIRSAVQEGYIGVKPGWTRVSFPYYMSEEDFEYIQKAIEFLAVYGQRFIPLYSFNLMNGSWRLKTEKFEALTKESNCNFPSHDIGVKVTRRDESYFDAAKCIASSLPKFPSQNIFQGNVDPNIFGFRV 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02255 635 SUPERFAMILY PLP-dependent transferases 83 546 IPR015424 -
Cca09g02255 635 Gene3D Aspartate Aminotransferase, domain 1 364 551 IPR015422 GO:0003824
Cca09g02255 635 PANTHER - 19 592 - -
Cca09g02255 635 Gene3D - 106 333 IPR015421 GO:0003824
Cca09g02255 635 PANTHER CYSTEINE DESULFURASE 19 592 - -
Cca09g02255 635 Pfam Aminotransferase class-V 89 429 IPR000192 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02255 Cca-Chr9 47778313 47781759 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02255 - - gmx:100777453 1119.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02255 09 47778313 47781759 Cca09g02255 09 47778313 47781759 ECH