Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02254 ATGGAGAGAAACCAATCTCATGCTGCTCATCGTCATCTTCTTGCATATTCCATCATACGTAAACTACGTCACGTGTTTAAAGCAAACAGATCCAAATTTGCAATAGCTGATGAAGGCCAAATTTCAAACACagaaaaagaagaagaagaagaagacgaCTCAGAGCCCTTTGAGAAGCTCGTAGAGATGAGCCTTCCGTGTGATGCATGCGTGGAACAAAAACTGTGTTGGTTACGGTCTCAGATAATAGGTTACCATGCAGAGTTCAACTCTCCTTTTGGAAAGCGAATACTTGTCTATGCTGATCACACGGCTTCTGCTCGCAGCCTTTACTTCAATGAAACCTTCATCACCAATCATCTTCTTTCTTTCTACGGAAACACTCACACGTGTGACAGTTACGTGGGAAGCAGGACAACAAAAATGGTGGAGGAAGCAAGTGAGTACATGAAAAAATGTTTAGGTGGTGGGGAAGATGATGCACTTATATTATGTGGCTCGGGCACAACTGCAGCCATCAAGAGGCTGCAAGAAGTGATGGGAATCGCTGTGCCCTCTATTTTGAGGGAAAGGGTTTTGAAGAGCCTTGGCACTAAAGAAAGATGGGTGGTTTTTGTTGGACCTCATGAGCACCATTCAAACCTTCTTTCTTGGAGGCAAAGCTTGGCTGAGGTGGTAGAGATTGGTTTTGATGATAAAGGCTTGCTTGACATGGATGCTCTAAGGTTACAACTTGAGACCTACAAAGATACAAATCGACCCATGTTGGGATCTTTCTCAGCTTGTAGCAATGTCACTGGAATCTACTCAGATACACCAGCAATTGCTCAGCTTCTTCATCATTACAAAGCCTTTGCATGCTTTGATTTTGCAGCCAGCGGTCCATACGTGGAAATAAAGATGAGGTCGGGGCAGAGTGATGGGTATGATGCAGTGTTTCTGAGTCCACACAAGTTTCTGGGTGGTCCTGACTCTCCTGGATTGCTCCTCATGAACAAGGCCCTCTATCGGTTGAGATCTTCGCCGCCATCAACTTGTGGAGGTGGAACCGTCGATTACGTCAATGGCTTCGACGAGAAGGATACAGTGTACATGGAGAAAATAGAGGAAAGGGAAAACGGGGGCACGCCTCCTATAATCCAGACAGTGAGAGCAGCATTGGCATTTTGGGTGAAAGAATACATAGGCTACAAAGAGATTGAGAAACGTGAACAACATTACATTAACAAAGCACTCAAAAGACTCGAGTCCAACCCAAACATTGAAATTCTTGGTAACTTGAGCACTAAGCGACAAGCTATATTGTCATTTATCATATACTCTACCACAAATAGTTCTTCATCACATGGTTGGGGCATTAAATGGCTAAGAGAACGTAATTTATGGAGCAAAAGAGGTAAGCTACTTCATGGCCCTTTTGTTGCAACACTTCTAAGTGACCTCTTTGGCATCCAAGCTCGTGGTGGCTGTGCTTGTGCTGGACCTTATGGCCATCAATTGCTCAATATCAACAAATCTCAATCACTTGCTATTAGATCAACAATCCAAGAGGGTTATGTTGGAGTGAAACCTGGCTGGACTAGGGTTAGCTTTCCTTATTACATGGACTGCGAGGAATTTGAGTTCATTTTAACAGCAATAGAGTTTGTAGCAATCTATGGCCAACGCTTCCTTCCCTTGTATAGCTTCAATTTGAGAAACGGCAGCTGGAGAATGAAGACAGACCAGCTTGAGGCTCTGATGAAGAAAAATAACTGCAACTTTCAAATAACTGTAGAGGAAACAAACAGTGAATCGAAAGCACTTGGAGTTAAACAAACTAGTAAGTTAAGGAAATCATACTTAGATAAAGCAAAATATATTGCTAGTCTTCTCCCCAAGTTCCCTTCTGAAGGCATACTCCATGGAAATGTAAATCCCAGTATCCTCTATTTTAGAGTTTAA 1944 0.4234 MERNQSHAAHRHLLAYSIIRKLRHVFKANRSKFAIADEGQISNTEKEEEEEDDSEPFEKLVEMSLPCDACVEQKLCWLRSQIIGYHAEFNSPFGKRILVYADHTASARSLYFNETFITNHLLSFYGNTHTCDSYVGSRTTKMVEEASEYMKKCLGGGEDDALILCGSGTTAAIKRLQEVMGIAVPSILRERVLKSLGTKERWVVFVGPHEHHSNLLSWRQSLAEVVEIGFDDKGLLDMDALRLQLETYKDTNRPMLGSFSACSNVTGIYSDTPAIAQLLHHYKAFACFDFAASGPYVEIKMRSGQSDGYDAVFLSPHKFLGGPDSPGLLLMNKALYRLRSSPPSTCGGGTVDYVNGFDEKDTVYMEKIEERENGGTPPIIQTVRAALAFWVKEYIGYKEIEKREQHYINKALKRLESNPNIEILGNLSTKRQAILSFIIYSTTNSSSSHGWGIKWLRERNLWSKRGKLLHGPFVATLLSDLFGIQARGGCACAGPYGHQLLNINKSQSLAIRSTIQEGYVGVKPGWTRVSFPYYMDCEEFEFILTAIEFVAIYGQRFLPLYSFNLRNGSWRMKTDQLEALMKKNNCNFQITVEETNSESKALGVKQTSKLRKSYLDKAKYIASLLPKFPSEGILHGNVNPSILYFRV 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02254 647 Pfam Aminotransferase class-V 117 440 IPR000192 -
Cca09g02254 647 Gene3D Aspartate Aminotransferase, domain 1 367 556 IPR015422 GO:0003824
Cca09g02254 647 SUPERFAMILY PLP-dependent transferases 98 548 IPR015424 -
Cca09g02254 647 Gene3D - 117 351 IPR015421 GO:0003824
Cca09g02254 647 PANTHER CYSTEINE DESULFURASE 55 647 - -
Cca09g02254 647 PANTHER - 55 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02254 Cca-Chr9 47768564 47775460 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02254 - - gmx:100776921 1063.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02254 09 47768564 47775460 Cca09g02254 09 47768564 47775460 ECH