Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02246 ATGAGAAATAGAAAGGGTGCTGAGAAAACAACAAGTCTAAGTAGATGGCTTATTATGAAGATGAAAATGGATGGTTTTAATGCTTCAATATGCCACACTTCTTGGTCCACCTCTTTGGGTTGTCCTGCTGGTGAATACGAGTATATTGAAGTGATGGTAGAGGGTGAGAAGAATGCGAGTCTTATAGTAGATATAGACTTCAGGTCGCAATTTGAACTTGCAAGGCCTACACAGCAATACAAGGAATTGACAGACTCACTCCCAGTGATTTTTGTTGGGGCTGAGACCAAACTTTGCAAAATAACTTCCCTTTTATGTTCTGCTGCCAAACAGTGCCTAAGAGAGAAGGGTCTCCACGTGCCACCATGGAGAACCGCTTCATACATGCAAGCCAAGTGGCTCTCTGTGACCCGTAAAGAGCCTAGCCATGCAAGTGATGATGAAAGGGAAACTTATGAGGGATTAAAGGGTGATGAACATGGTAATATTAATGGTAACTGGGTACCTCCATTACTGAAACCAAAGAAAAGGGATTTGGGTGGTGGATCTGGTTTGTCGAGTCAGTTGTCTGACATGAGTGTAAATTGTTGCTAG 594 0.4276 MRNRKGAEKTTSLSRWLIMKMKMDGFNASICHTSWSTSLGCPAGEYEYIEVMVEGEKNASLIVDIDFRSQFELARPTQQYKELTDSLPVIFVGAETKLCKITSLLCSAAKQCLREKGLHVPPWRTASYMQAKWLSVTRKEPSHASDDERETYEGLKGDEHGNINGNWVPPLLKPKKRDLGGGSGLSSQLSDMSVNCC 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02246 197 TIGRFAM A_thal_3542: uncharacterized plant-specific domain TIGR01615 18 138 IPR006502 -
Cca09g02246 197 MobiDBLite consensus disorder prediction 139 169 - -
Cca09g02246 197 Pfam PDDEXK-like family of unknown function 6 137 IPR006502 -
Cca09g02246 197 PANTHER T14N5.3 PROTEIN 2 182 - -
Cca09g02246 197 MobiDBLite consensus disorder prediction 139 157 - -
Cca09g02246 197 MobiDBLite consensus disorder prediction 178 197 - -
Cca09g02246 197 MobiDBLite consensus disorder prediction 183 197 - -
Cca09g02246 197 PANTHER OS03G0796600 PROTEIN 2 182 IPR006502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02246 Cca-Chr9 47669378 47671300 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02246 - - gmx:100782815 301.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02246 09 47669378 47671300 Cca09g02246 09 47669378 47671300 ECH