Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02244 ATGGCACTCTCTActtcttcttcttcttcttcttcttcttctCTCCATTCACCTTCGCTTCTGTGTCTTCCAAAGCCCTTCTCTTCTTCTTCTGTTACTTTGACACTCCGCAGTTCAACCTCCCACGCCAATCTCACCCTTCGCTCTTCTTATTCCGAATTGGGCTCTTCCCCTGAGCCCATCAATTTCAGGAAGACCGAGATTTCGTCCATGTCCCATTTGGGACTCTCCATGAATGAAAGTAGCAGGGCATCTTTCAAGTGGCGAAGGGTTTTGCTCAAAGTCAGCGGAGAAGCACTTGCAGGAGACAACGCTCAGAATATTGACCCTAAGATAACCATGGCCATTGCAAGGGAGGTGGCAGCTGTAACTCGCCTTGGCATTGAGGTAGCACTAGTAGTTGGTGGGGGTAACATCTTCCGTGGATCCTCCTGGGCTGGATGTAGTGGACTAGATCGCTCATCTGCTGATTATATTGGGATGTTGGCCACTGTCATGAATGCTATATTTCTTCAAGCAACAATGGAGAGTATTGGCATTCCTACTCGGGTGCAGACCGCATTTCGCATGTCTGAGGTTGCGGAACCATATATACGCAGAAGGGCTGTAAGGCATTTGGAAAAAGGAAGGGTTGTCATTTTTGCTGCTGGAACTGGAAATCCATTCTTTACCACAGACACTGCTGCAGCACTCCGGTGTGCAGAGATTAATGCAGAGGTTGTACTCAAAGCAACTAACGTCGATGGAGTTTATGATGAGGACCCAAAGCGTAATCCACAAGCACGTCTTCACGACACACTAACCTATCAGGAGGTAACTTCAAAGGATCTGTCAGTGATGGACATGACTGCCATAACATTATGCCAAGAAAATAATATTCCTGTTGTTGTGTTCAATCTAAACAAACCTGGTAACATTGAGAAAGCTATTAGAGGCGAAAGAGTTGGCACTTTGATTGGGGCAAGCTGGAATTCTACCCTGAGGATGCCAAAAATGTGA 999 0.4535 MALSTSSSSSSSSSLHSPSLLCLPKPFSSSSVTLTLRSSTSHANLTLRSSYSELGSSPEPINFRKTEISSMSHLGLSMNESSRASFKWRRVLLKVSGEALAGDNAQNIDPKITMAIAREVAAVTRLGIEVALVVGGGNIFRGSSWAGCSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVYDEDPKRNPQARLHDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNKPGNIEKAIRGERVGTLIGASWNSTLRMPKM 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02244 332 Gene3D - 78 326 IPR036393 -
Cca09g02244 332 Pfam Amino acid kinase family 90 299 IPR001048 -
Cca09g02244 332 PANTHER URIDYLATE KINASE 76 322 - -
Cca09g02244 332 SUPERFAMILY Carbamate kinase-like 86 319 IPR036393 -
Cca09g02244 332 TIGRFAM pyrH_bact: UMP kinase 89 319 IPR015963 GO:0005737|GO:0006221|GO:0033862
Cca09g02244 332 CDD AAK_UMPK-PyrH-Ec 89 320 IPR015963 GO:0005737|GO:0006221|GO:0033862
Cca09g02244 332 Hamap Uridylate kinase [pyrH]. 86 320 IPR015963 GO:0005737|GO:0006221|GO:0033862
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02244 Cca-Chr9 47659224 47662398 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02244 K09903 - gmx:100781745 548.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02244 09 47659224 47662398 Cca09g02244 09 47659224 47662398 ECH