Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02235 ATGGCATCGTCACATGGTCATGCACACTCGGACGCTGCAAAGATGGAACAAATAATCACCGAGTTCTTCGCCAAGAGCCTTCACATAATACTTGAATCAAGGTCTCTGTATGCGTCCTCGCGCAATTCCTATGGTGATCAAGTTGTTTCGTCGCCGTGTTCATCGTCTTCATCTTCATCAAGTGTGAGGCCGAGGGATAAGTGGTTCAATTTGGCGCTCCGGGAGTGCCCCGCGGCGATGGAGAACATTGACCTCTGGCGCCAGAACAATCTTGAGTGCATAGTGATTGATGTGGTTTTGGTGCAGAGGCCTCTGGATTGGGACCCTGTGGCTGTGAGTTTTTCCCCGAAAAGGGTTGTTCCTAGGAGTTCCTCACTGAAAGAAAGATGCCCTTTTGGCTGGAACAATAATGATCAGGAGGAATTGGGGGTTGTGGAGAGGTGGGTTGTGCAGTATGAGAGTAGGAGGACAAGGGATTCTAATTCTGGCTCTAGGAGGTCAAGCAATGTTTCTTTGCATAGCTTGTATAAGAAATCAACTTTACTTTTGAGGTCTTTGTATGCCACTGTCAGGCTTTTACCTGCCTATAAAATTTTCAGAGAGCTTAATTCATCAGGACAGATTAGGGACTTTACCCTTGCTCACCGCGTGTCTTCCTTTTTCGAGCCCTTCACCCGTAAAAAAGAGGCTGAAATGATGAAATTCGGATTCACCCCTGTGGATACTTCTTCTGGTAGGTTGTGTCTTAGTGTGATGTATTGCCCCTCAACCTCTGATGTGAGCTCAGAACCTTCGACTCCCATGTCCCCACAAGTTATATCTGACTATGTTGGGAGTCCACTTGCTGATCCCTTGAGGAGGTTTCCTTCTCTTCCTGTGGCAGGGTTGCCATTGCACGCCTCTCCATCGTCCTTGCCATCATCTAGGCCGCGAAGTTTGAGTTTTGATCATTATAGAGCCTCGCCTCCGTCTTATTTTCCTTCGCCTATGCATTCAGAATCACTCTCATCAGTGTATAATGCTGGTTTGCGGCGTTTCCCCCCTGCAAGTTTGCCTCCTCCTCCAACTGAGATGCCTTTGATCCAGAAGAAGAATACAAATTTTGATGATTATTATCCCTCTCCATCACCTTCAACTTATAGTTCCGGGTGCAAGCCACTTTTACGATCTGAAAGTGCTCCAGTCAGCATACCTACTGCTAAAGTTGCTAATTCCCCTGGATACTCCAATAGATATAATTTGCCTCCATCACCTCCCCTAAGAGCTTCAAGGGGCACCGCTAAGATTGATACAAGTACAACCACATTGCAAACAGGTGCAACAGCTGAGAAGTTGTTTTCTCTTGGAAAAGAAGAGTCCCGAAAATATTCTGGAGTCAAGATATCAGCTAACAGCTCACCACAGATTTCAATTTCCAGAAGCTCCAGTAGGTCTTATCAGGATGATTTTGATGATGCTGATTTTACTTGTCCGTTTGATGTGGATGATGATGATATGACGGATCCAGGAAGCAGAGCTGAGTCTTTAGATCATGGTCATATGGCTGAGACGCTTGAAGCTGGAGGATTCTTTCCCACTAGAAAATCTCATGATGCTGCTGTTGGTGCACTTGTACATATGCTGAAGAAAGCGCCACCTCTCCGTCAAGATTACTCTGCCTCACAACACCTGTCACAAGGTACACACCCTGAAACCTGGAACAATAACATTCAAGGAACTAATCAGATCCTAGAGGCATCAAAGCCAGCGAGCATAATGTCTTCCGGGATGATAGCCACTAGGAAAACAACAGCTGATGCATTGGAAGAGTTCCATGGTTACAAAGAGATGAAAAACTTGTTGCTCATGCGAGGTAGTAAGCACTAG 1866 0.4598 MASSHGHAHSDAAKMEQIITEFFAKSLHIILESRSLYASSRNSYGDQVVSSPCSSSSSSSSVRPRDKWFNLALRECPAAMENIDLWRQNNLECIVIDVVLVQRPLDWDPVAVSFSPKRVVPRSSSLKERCPFGWNNNDQEELGVVERWVVQYESRRTRDSNSGSRRSSNVSLHSLYKKSTLLLRSLYATVRLLPAYKIFRELNSSGQIRDFTLAHRVSSFFEPFTRKKEAEMMKFGFTPVDTSSGRLCLSVMYCPSTSDVSSEPSTPMSPQVISDYVGSPLADPLRRFPSLPVAGLPLHASPSSLPSSRPRSLSFDHYRASPPSYFPSPMHSESLSSVYNAGLRRFPPASLPPPPTEMPLIQKKNTNFDDYYPSPSPSTYSSGCKPLLRSESAPVSIPTAKVANSPGYSNRYNLPPSPPLRASRGTAKIDTSTTTLQTGATAEKLFSLGKEESRKYSGVKISANSSPQISISRSSSRSYQDDFDDADFTCPFDVDDDDMTDPGSRAESLDHGHMAETLEAGGFFPTRKSHDAAVGALVHMLKKAPPLRQDYSASQHLSQGTHPETWNNNIQGTNQILEASKPASIMSSGMIATRKTTADALEEFHGYKEMKNLLLMRGSKH 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02235 621 MobiDBLite consensus disorder prediction 458 477 - -
Cca09g02235 621 Pfam Autophagy-related protein 13 19 254 IPR018731 GO:0006914|GO:1990316
Cca09g02235 621 PANTHER UNCHARACTERIZED 9 620 IPR040182 GO:0000045
Cca09g02235 621 Gene3D HORMA domain 4 259 IPR036570 -
Cca09g02235 621 MobiDBLite consensus disorder prediction 456 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02235 Cca-Chr9 47555323 47561612 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02235 K08331 - gmx:100798585 954.896
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02235 09 47555323 47561612 Cca09g02235 09 47555323 47561612 ECH