Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02231 ATGGTTAAGCTAGTGCAGCCACCAATGAGAGATTCCCACGTGAGTCCCCTCATTTGTAGAACAATGAATGTCATGAAACTTCAAAGGTTTGCCCCAGCTAGAAATCATTCAAGGTTAAACACCTCAAGATTTGGTGAGAGACCATTGTGGTTTAGACCCATCACAATTATTAAAGTTGCAGAACACAATTCTGGCTCAGGCTTGGATGAGCTTGAAACACTTGCTCAGAAGAAAATAGAGATTTACCAAGCGGTGGAAGGAATCAATAGGGGAATCTTCGGAATCCCATCAGCCAAGAAATCTGAAATTGAAAGTTTGGTGAAGCAGCTAGAATCTCTGAATCCAAATCCATACCCAACTCTTGAACTTGACAAGGTGGGTGGGTGCTGGAGGCTTGTATACAGTACAATCTCAATTTTGGGATCAAAGAGGACCAAGTTAGGCCTTAGAGACTTTATCTCATTGGATGATTTTTTTCAGACTATTGACATATCCAAGAGCAAAGCAGTTAATGTGATCAAGTTCAGTGCAAGAGGGTTGAGTTTGTTGTCTGGACAACTTAGTATTGAGGCCTCTTTCAAGATTGCATCCACAACAGTTAAAACTTCACTCCTTGTTTCCTCACTTTTTTCTCTCTCTCGGTAA 645 0.4109 MVKLVQPPMRDSHVSPLICRTMNVMKLQRFAPARNHSRLNTSRFGERPLWFRPITIIKVAEHNSGSGLDELETLAQKKIEIYQAVEGINRGIFGIPSAKKSEIESLVKQLESLNPNPYPTLELDKVGGCWRLVYSTISILGSKRTKLGLRDFISLDDFFQTIDISKSKAVNVIKFSARGLSLLSGQLSIEASFKIASTTVKTSLLVSSLFSLSR 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02231 214 PANTHER FIBRILLIN-5, CHLOROPLASTIC 2 201 - -
Cca09g02231 214 Pfam PAP_fibrillin 78 198 IPR006843 -
Cca09g02231 214 PANTHER - 2 201 IPR039633 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02231 67 197 Acyl Lipid Metabolism Gene Families AT4G22240 29.771 3.37e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02231 - - gmx:100804084 347.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02231 09 47524421 47526780 Cca09g02231 09 47524421 47526780 ECH