Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02225 ATGGGCGCTTTGTATCAAATTGTTCTTTTGAACATTGTTGTTTATTTTGCATCAGTGATGCACACCTCCTCAAGGAGCATGCCACTAGACTTAACATTCGGTTTCACTGCTCTCCCTCTGAACGCCTCCAACTTTAAACATCACAAGCCTTACAATTTACCGGAAAGACAACGCTATAGTTTCAAAAACGGAGTACACAAGCTGTGGGTATACGCCACAGACAAACCTATGTCCCCACATACCAAAACCAATCCTCGTTCAGAAATCCGCATTGAGGGCTTGGATTATTCAAGCGGGGTATGGCAATTTGAAGGGCAAGGTTTTGTGCCTGATGGTACTTCTGGGGTGTGCGTTATGCAGGTCTTTGGGGCACATCCTAAACGTTCGACCACTCTTATGCTTGATGTTTATGACGATTCCCTTACGTATTATAGACATTCTGTGGTGGTTCCAAACATACGGGACCAATGGTTCAAGTTGAATGTGATCCATGACGTGGAGGCCTCCAATGTGAAGATTTATGTTGATGGGGTTCATGTTTATGATGCCCCGGGACAAGGAGGGAGATTCCATTATTTCAAATTTGGTGTCTATGCACAAGATAATCCTTCGTGCTATATGGAGTCAAGGTGGAAAGGGATCAGAGTTCTAAGGAAGTCTTCATGA 666 0.4399 MGALYQIVLLNIVVYFASVMHTSSRSMPLDLTFGFTALPLNASNFKHHKPYNLPERQRYSFKNGVHKLWVYATDKPMSPHTKTNPRSEIRIEGLDYSSGVWQFEGQGFVPDGTSGVCVMQVFGAHPKRSTTLMLDVYDDSLTYYRHSVVVPNIRDQWFKLNVIHDVEASNVKIYVDGVHVYDAPGQGGRFHYFKFGVYAQDNPSCYMESRWKGIRVLRKSS 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02225 221 SUPERFAMILY Concanavalin A-like lectins/glucanases 50 204 IPR013320 -
Cca09g02225 221 Pfam Alginate lyase 43 216 IPR014895 -
Cca09g02225 221 Gene3D - 44 218 - -
Cca09g02225 221 PANTHER CITRATE-BINDING PROTEIN-LIKE 15 220 - -
Cca09g02225 221 PANTHER BINDING PROTEIN, PUTATIVE, EXPRESSED-RELATED 15 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02225 Cca-Chr9 47453686 47454976 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02225 - - gmx:100803497 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02225 09 47453686 47454976 Cca09g02225 09 47453686 47454976 ECH