Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02096 ATGTGGTGGATGATGGCCGAGACTGGTGGCAATTACTGCTCTAAGAAGAAAGATGATTTGTGCAGCAATGTTTGTGGCCAGGAATCAAGTCAAGTATCGGGCATGTCAAGAGTTCGCTGCATTCTGCGTGGGTTGGATGTGAAAACCTATATATTCATGTTTGCTGTTGTCCCAATGTGCATCTTTGGAATCTATATACATGGGCAGAAGATCTCCTACTTTCTGCGGCCGCTATGGGAGAAACCACCCAAGCCTTTCAATGTCATCCCTCATTACTATAACGAAAATGTCACCATGGAGACTCTATGCAAACTTCATGGATGGGGTGTCCGGGAGTACCCTAGACGTGTTTATGATGCTGTGTTGTTCAGTAATGAGTTGGAAATACTTAACTTGCGCTGGAGAGAATTGTACCCTTACATCACTGAATTTGTTCTCCTGGAGTCAAATTCTACATTTACCGGATTGCCTAAGCCCCTGGTTTTCAAGAGCAACAGGGAGCAGTTCAGCTTTGTCGAGCCCCGGTTAACTTATGGGACAATTGGTGGGAGATTTAAGAAAGGAGAAAACCCATTTGTTGAGGAGGCATATCAGCGTGTGGCGTTGGACCAACTCCTCAAGATAGCTGGTATCACTGATGATGACTTGTTGATTATGTCTGATGTGGATGAGATACCAAGTGCTCACACTCTTAACCTCTTGAGGTGGTGTGATGAAGTACCCTCAATCCTTCATCTGCAGCTGAAAAATTATCTCTATTCATTCGAATTTCGCGTGGATGATAAGAGCTGGAGGGCTTCAATCCATAGGTATCAATCTGGTAAGACAAGGTATGCACATTATCGCCAGTCTGATGACATGTTGGCAGATGCTGGCTGGCATTGTAGCTTTTGCTTTCGTCGAATCAGCGATTTCATTTTCAAGATGAAAGCCTACAGTCATTATGATAGAGTCAGGTTCTCTCATTATTTAAATCCTGAAAGAATTCAGAAAGTAATCTGCAAAGGGGGTGATTTATTTGATATGCTGCCAGAGGAGTACACTTTCAAGGATATCATTGGTAAAATGGGACCAATACCCCATTCCTATTCTGCAGTTCATCTTCCTGCTTTTCTTCTGGAAAATGCTGAGGAGTATAAATTTCTCTTGCCTGGAAATTGCAAGAGAGAGAGATGA 1176 0.4311 MWWMMAETGGNYCSKKKDDLCSNVCGQESSQVSGMSRVRCILRGLDVKTYIFMFAVVPMCIFGIYIHGQKISYFLRPLWEKPPKPFNVIPHYYNENVTMETLCKLHGWGVREYPRRVYDAVLFSNELEILNLRWRELYPYITEFVLLESNSTFTGLPKPLVFKSNREQFSFVEPRLTYGTIGGRFKKGENPFVEEAYQRVALDQLLKIAGITDDDLLIMSDVDEIPSAHTLNLLRWCDEVPSILHLQLKNYLYSFEFRVDDKSWRASIHRYQSGKTRYAHYRQSDDMLADAGWHCSFCFRRISDFIFKMKAYSHYDRVRFSHYLNPERIQKVICKGGDLFDMLPEEYTFKDIIGKMGPIPHSYSAVHLPAFLLENAEEYKFLLPGNCKRER 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02096 391 Pfam Glycosyltransferase family 17 45 390 IPR006813 GO:0003830|GO:0006487|GO:0016020
Cca09g02096 391 PANTHER BETA-1,4-MANNOSYL-GLYCOPROTEIN BETA-1,4-N-ACETYLGLUCOSAMINYL-TRANSFERASE 1 391 IPR006813 GO:0003830|GO:0006487|GO:0016020
Cca09g02096 391 PANTHER BETA-1,4-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 1 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02096 Cca-Chr9 45967285 45970110 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02096 1 390 Glycosyltransferase AT1G12990 78.462 0.0 678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02096 K00737 - gmx:100787062 784.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02096 09 45967285 45970110 Cca09g02096 09 45967285 45970110 ECH