Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02087 ATGAGAAACGAGAAATGTGAGCATGAAATGAAAGTTATGGAAGGCGCAATGGCAGAGAAATGGATAGAAATAGTGATATGGGTTGTAATTTCAACGTCATTAATGCGAAATGGAAGTGGAACTAAAGAGTGCAGTTTCCCAGCCATTTTCAACTTGGGAGATTCCAACTCTGATACAGGCGGTATCTCAGCAGCGTTCGGGCAAGCACCTCCCCCCAACGGAATCACTTTTTTCCACTCTCCTCACGGACGCTTCTCCGATGGTCGTCTCATTATCGATTTTTTAGCCAATACCTTCGACTTGCCTTTTCTCAGTGCTTACTTGGACTCCGTGGGCTCTAACTTCACTCACGGTGCCAATTTCGCAACCGCCGGCTCCACCGTAAGACCTCAGAACACAACTAGGTCTCAGAGCGGATACAGTCCCATTTCCCTAGATGTTCAGTTTCAGCAGTTCTCTGATTTCAAAACCAGATCCAATCTCCTTCGCAAGCAAGGAGGGGTGTTTAAGGAATTATTGCCCAAGAAGGAGTATTTTTCTCAGGCTCTATATACCTTTGATATTGGCCAAAATGATCTCACTGCTGGCTACAAACTCAACTTAACCACAGAACAAGTCAAAGCATATATACCTGATGTATTGGGCCAGTTCTCCGATGTCATAAAGGGTGTGTATGGGAAAGGTGGAAGGTCGTTTTGGATACACAACACAGGCCCATTGGGATGCCTGCCATACATGCTGGACCGCTATCCCATGGAACCAGCCCAAATGGATGAGTTTGGGTGTGCCAAACCATTCAACGAGGTGGCCCAATATTTTAATTACAAACTGAAAGAAGCTGTTGAGCAACTAAGGGAGGAATTGCCAGAGGCTGCAATCACCTATGTTGACGTGTATACAGTGAAGTACACCCTCATCAGCGATGCCCAAAAATACGGTTTTGAGCATGGTGTGATAGCATGCTGTGGACACGGTGGAATATACAACTTCGATAACAAAGCGAGATGTGGAGCAACCAAAAGGGTGAATGGGAAAGAGATTGTGATAGCCAAATCGTGCAAAGATCCAAGTGTGAGGATTATTTGGGACGGAATCCATTACACCGAAGCTGCGAATAATTGGATCTTCCAACAAATAGTCAATGGCTCCTTCTCATATCCACCTTCCCCTTTAAAAATGGCTTGTTATGGTCATTCATTCATCCATCCCCAGTGA 1215 0.4519 MRNEKCEHEMKVMEGAMAEKWIEIVIWVVISTSLMRNGSGTKECSFPAIFNLGDSNSDTGGISAAFGQAPPPNGITFFHSPHGRFSDGRLIIDFLANTFDLPFLSAYLDSVGSNFTHGANFATAGSTVRPQNTTRSQSGYSPISLDVQFQQFSDFKTRSNLLRKQGGVFKELLPKKEYFSQALYTFDIGQNDLTAGYKLNLTTEQVKAYIPDVLGQFSDVIKGVYGKGGRSFWIHNTGPLGCLPYMLDRYPMEPAQMDEFGCAKPFNEVAQYFNYKLKEAVEQLREELPEAAITYVDVYTVKYTLISDAQKYGFEHGVIACCGHGGIYNFDNKARCGATKRVNGKEIVIAKSCKDPSVRIIWDGIHYTEAANNWIFQQIVNGSFSYPPSPLKMACYGHSFIHPQ 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02087 404 PANTHER BNAA06G32900D PROTEIN 24 396 - -
Cca09g02087 404 Gene3D SGNH hydrolase 36 383 IPR036514 -
Cca09g02087 404 Pfam GDSL-like Lipase/Acylhydrolase 49 379 IPR001087 GO:0016788
Cca09g02087 404 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 24 396 - -
Cca09g02087 404 SUPERFAMILY SGNH hydrolase 179 380 - -
Cca09g02087 404 CDD SGNH_plant_lipase_like 47 383 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02087 Cca-Chr9 45903519 45905786 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02087 47 382 Acyl Lipid Metabolism Gene Families AT4G10950 29.107 1.40e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02087 - - gmx:100803899 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02087 09 45903519 45905786 Cca09g02087 09 45903519 45905786 ECH