Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02079 ATGTCTCGCCGAGAGACCAACCCTCATTTTACTAGATCATCACGGCCTGAATACGTAGATCATGATACTGAGCAACAACATATTCCATTTGTGCCACCACGCCACAAACACCGTGGCCAACCATCAACACATGGAGCTGCACCTATACCAGATGTGTCGCCACGCCACAAACACCGTGGCCAACCATCAACACATGGAGCTGCACCTATACCAGATGTGTCGCCACGCCACAAACACCGTGGCCAACCATCCACACATGGAGCTGCACCTACACCAGATGTGCCGCCACGCCACAAACGCCGTGGCCAACCATCCACACATGGAGCTGCACCTATACCAGATGTGTCGCCACGCCATCATGAAGATCGTGTTCCATTACGAGTACGTCATGAAGACCATGTTCCACTGCAACATGCGCCAGAACATCATTCACACACACCACCTATACTGCAAGAGCCACACCGCGGAAAATCGCAGCAAAGAAGTCCACGTAAACAGCCAACAAGCCAAGGTTTCCGGCCACCGAAATCTGCTAAGGTAAATTTTCAAGAGCCACCACCCTTGGCTGCTGGCACTCCAGCGCAGCCACTACCTGACTATCCTCTCGAGCCTCGGCACCGGCCACGCCATGATCACCCCCCCCACCACGGTATAAAGTTGCCTGAAGATAAAAAGTCTCATACCTTAACATGGTTAGCTGCTTGCTTGTGTGTAATATTCTGTCTTGTCATAATCATAGGAGGTTTAATAGTCCTTATAGTGTACTTCATTTTTCGTCCCCAAAGTCCTCATTTTGATGTCTCTAGTGTCACCTTAAATGCTGCATACCTTGACCTTGGATATCTACTCAATGCTGATCTAACCATGCTTGCTAACTTCACAAATCCAAACAAGAAGGTACACGTGGACTTCAGCTCCGTGATCATCTATCTCTACTATGGAAGTACCCTCATTGCCACTCAATATGTTGAGCCCTTTTCGGCTGCAAGGCTTCAATCAAGGTTTGCAAACATCCACATGGTCTCTAGTCAAGTTCAGCTGCCATTAAGAGAGAGCCAGCGCCTTGTTAAGCAAATGGAAAGCAATGGCGTTTTGCTTGAAGTCAGAGGAGTTTTCCGTGCAAGGTCCAAATTGGGAAGCATCTTGAGGTATTCATATAATCTCTATGGCCGTTGCAGCGTCATGCTAACACGCCCCCCTGACGGAATTTTGCTCAAAAAGAAATGCAGAACGAAACGCTGA 1242 0.4863 MSRRETNPHFTRSSRPEYVDHDTEQQHIPFVPPRHKHRGQPSTHGAAPIPDVSPRHKHRGQPSTHGAAPIPDVSPRHKHRGQPSTHGAAPTPDVPPRHKRRGQPSTHGAAPIPDVSPRHHEDRVPLRVRHEDHVPLQHAPEHHSHTPPILQEPHRGKSQQRSPRKQPTSQGFRPPKSAKVNFQEPPPLAAGTPAQPLPDYPLEPRHRPRHDHPPHHGIKLPEDKKSHTLTWLAACLCVIFCLVIIIGGLIVLIVYFIFRPQSPHFDVSSVTLNAAYLDLGYLLNADLTMLANFTNPNKKVHVDFSSVIIYLYYGSTLIATQYVEPFSAARLQSRFANIHMVSSQVQLPLRESQRLVKQMESNGVLLEVRGVFRARSKLGSILRYSYNLYGRCSVMLTRPPDGILLKKKCRTKR 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02079 413 MobiDBLite consensus disorder prediction 138 221 - -
Cca09g02079 413 MobiDBLite consensus disorder prediction 162 176 - -
Cca09g02079 413 PANTHER PROLINE-RICH RECEPTOR-LIKE KINASE 164 413 - -
Cca09g02079 413 MobiDBLite consensus disorder prediction 1 31 - -
Cca09g02079 413 MobiDBLite consensus disorder prediction 1 119 - -
Cca09g02079 413 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 164 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02079 Cca-Chr9 45846922 45848163 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02079 - - gmx:100791466 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02079 09 45846922 45848163 Cca09g02079 09 45846922 45848163 ECH