Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02078 ATGGCCGGCGCCGGCGACCTAGATGCTGATGCGGTGCTCAGCGACGTCGAGGACGACGCCGGAGATCCCACTCCGATCGCTAAACCTCCCTCGCCGGAAGATGTCTCCGTTGAGAAACTCCGGGAGGTTATGGAAGAACTCGATCGCGAGCGACAAGCGCGCGTTGCCGCGGAGAATGCCAAGTCCGAATTGCAGGTTTCGTTCAACCGGTTGAAGGCTTTGGCACACGAGGCAATAAAGAAGCGCGACGATTTCGGGCGTCAGCGCGACGACGCTGTTCGGGAGAAGGAGGAGACGGCAAAGCGATTGGAAGAAACGACAAAGCATTTGGAAGAAACGGCAAAGGAACGTGACGCACTGCGATCGGAGATTGGGAATTCGAGCCACATGCTCGTCACCGGCATGGAGAAGATCTCGGCGAAGGTCAGCAGTTTCGCCGGCAACGCGCTGCCCTTGCCGCGGTCGCAGAAATACACCGGCATGGCGGCGGCGGCTTATGGCGTCATCAAGCGCGCGAATGAGATTGTGGAAGAGCTTTTGAAACAGAATGAAGCGACTGTCAAGGCTAGGAACGAGGCGAGAGAGCAGATGGAGCAGCGGAATTACGAGATTGCTATTGAGGTTTCTCAGCTTGAGGCCACGATCAGTGGCTTGAGGGATGAGGTTGCGAAGAAGGTTTCTGAAGTTGAGGGTTTGGAGAAGGATTTGGCTGTTAGGGATCAGAAGTTGAATGTTGTTTCGGAGAATTTGAGTAAGGGGGAAAATGAGGCTTTGCAGTTGAGGGAGTTTGTTGGTGAGTGCGAGGACAAGTTGAGTAAGTTGGAATCTCGGATGGAAGCTCAAAGGCCTTTGTTGATTGATCAGTTGAGTTTTGTTTCCAAAATTCATAACCAGATTTGCAATGTTGTTAAGATACTTGATGATGGTGGCACCTCGGAGCTGTCTGAATCGTTGTTTGTCCCGCAAGAAACGGACGTTGAGGAGAATATACGTGCCTCTTTGGCTGGTATGGAGTCCATATATGAGTTGACTAAGGTTGTTGTTCAGAAAGCAAAAGATGTGGTTGAGGAGAAGAATCACGAGATCAAGAGTTTAGATGAGACGGTGAATCGGTTAGTTAAAGAGAAGGATCAAATTGGTTCCTTGCTTAGGAGTGCCTTGTCTAAGAGGATGGCAATCGATCCATCCTCTAGAAAGAGTGAGTTGTTTCAAGCAGCAGAGAATGGGTTGAGGGAGGCTGGGATAGATTTCAAATTTAGTAAACTTATTGGAGATGGAAAGGTTGCGGATTCAAATGAGAAGTCGGATAGAGCGGAGAAAGAAGAGGAAGATGAAATATACTCATTGGCTGGTGCTTTGGAGGATGTAGTTAAAGCATCTCAGCTTGAGATCATTGAGCTGCAGCATACTGTGGATGAATTAAGGGCAGAGTTAAGCTTACTTAAGCAGCATATAGAAGCTCAGGCCAAGGAGCTTGACCATAGAATGCATCGGATAGAGGAACTTGAAGAGAAGGAGAGAGTGGCAAATGAAAATATTGAGGGGTTAATGACAGACATTGCTGCTGCTGAAGAAGAAATTAACAGATGGAAAGTAGCAGCAGAGCAAGAAGCTGCTGCAGGCACAGGTGTCGAACAAGAATTTGTGGCACAGTTGTCAGCACTTAAGCAGGAACTTGAAGAGGCAAAGCAATCCATGTTAGAATCAGAGAAGAAACTAAAATTCAAAGAGGAGACAGCAGCTGCTGCCATGGCAGCCAGAGATGCAGCAGAAAAGTCTCTTAAGTTAGCAGACATGAGGTCGTCTAGACTAAGAGATAGAGTTGAGGAGCTTACTCATCAGCTAGAAGAGTTAGAGAACAGGGAAGATTCAAGGAGCCGAAACCGGCCTAGATATGTGTGTTGGCCATGGCAGTGGCTCGGCATGGACTTCGTTGGATTTCAGCAGCGACCTGATACACAGCAGGAGGCTTCTAACGAAATGGAACTTTCCGAGCCCCTGTTATAA 2007 0.4858 MAGAGDLDADAVLSDVEDDAGDPTPIAKPPSPEDVSVEKLREVMEELDRERQARVAAENAKSELQVSFNRLKALAHEAIKKRDDFGRQRDDAVREKEETAKRLEETTKHLEETAKERDALRSEIGNSSHMLVTGMEKISAKVSSFAGNALPLPRSQKYTGMAAAAYGVIKRANEIVEELLKQNEATVKARNEAREQMEQRNYEIAIEVSQLEATISGLRDEVAKKVSEVEGLEKDLAVRDQKLNVVSENLSKGENEALQLREFVGECEDKLSKLESRMEAQRPLLIDQLSFVSKIHNQICNVVKILDDGGTSELSESLFVPQETDVEENIRASLAGMESIYELTKVVVQKAKDVVEEKNHEIKSLDETVNRLVKEKDQIGSLLRSALSKRMAIDPSSRKSELFQAAENGLREAGIDFKFSKLIGDGKVADSNEKSDRAEKEEEDEIYSLAGALEDVVKASQLEIIELQHTVDELRAELSLLKQHIEAQAKELDHRMHRIEELEEKERVANENIEGLMTDIAAAEEEINRWKVAAEQEAAAGTGVEQEFVAQLSALKQELEEAKQSMLESEKKLKFKEETAAAAMAARDAAEKSLKLADMRSSRLRDRVEELTHQLEELENREDSRSRNRPRYVCWPWQWLGMDFVGFQQRPDTQQEASNEMELSEPLL 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02078 668 Coils Coil 348 375 - -
Cca09g02078 668 PANTHER PARAMYOSIN 1 668 - -
Cca09g02078 668 Coils Coil 93 123 - -
Cca09g02078 668 Coils Coil 457 540 - -
Cca09g02078 668 MobiDBLite consensus disorder prediction 1 36 - -
Cca09g02078 668 Coils Coil 601 628 - -
Cca09g02078 668 Coils Coil 40 60 - -
Cca09g02078 668 Coils Coil 545 579 - -
Cca09g02078 668 Coils Coil 169 200 - -
Cca09g02078 668 MobiDBLite consensus disorder prediction 85 118 - -
Cca09g02078 668 Coils Coil 208 235 - -
Cca09g02078 668 PANTHER OS08G0559800 PROTEIN 1 668 IPR040300 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02078 - - gmx:100800693 1121.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02078 09 45839694 45844909 Cca09g02078 09 45839694 45844909 ECH