Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01834 ATGGACGCGCCACAATTGCAGATGCACATAGCAATGTACCCATGGCTTGCTATGGGACACATAACAACATATCTCCACCTAGCCAACAAATTAGCCAAGAGAAGACACAGAATCTCCTTCTTCATACCCAAACGAACAAAGGCAAAGGTGGAACATTACAACCTCTATCCACACTTGATAACCTTCATCCCCATCACCATTCCCCACGTTGATGGCCTTCCTCCTCAGGCTGAAACCACTTTTGATGTTCCCTTATCTTTAGCCACACTTTTTATGACTGCCATGGATCGCACTAAGAAGGACATCGAACCACTTTTACATGAGCTCAAACCTAACGTTGTTTTTTTTGATTTTGCATTGTGGATACCCAGCTTGGCTCGGAGCTTAGGCATCAAGTCTCTTCAGTACATTACTGTAAACGTGATGTCAGTAGCTTTTATAGAATCCATGAAGAAGCAGTGTCAACAAAATAACTTAGTTGAAGATGATGAGATGAATCTCATGAATAGTCCCCCAGCTGGGTTCCCAGATTCTTCCATCAAGCTTCATGCTCATGAGGTTCGAGGATTAGCTTCATTCATGAAACTTGAAGTTGGTGGTGTTAGTTTCATGGACCACGTCTGCACTGGAGCCAATTTGTCAGATGCAGTGGGATTTAGAGGTTGTAGAGAAATTGAGGGACAATATGCTGAGTTTCTTGAAAGTTTCTATTGGAAGCCTCTTTTGCTTTCAGGGCCTGGGTTACCAGATCCACCCAACTCCACTTTGGAACAAAAATGGGCTCAATGGCTTGCAAGATTTAACCCTGGTTCGGTCATATACTGTGCATTTGGAAGTGAATGCAGGATGGTTCAAGATCAGTTCAAGGAACTATTGCTGGGTCTTGAGTTAACAGGTTTTCCATTTCTGGCAGCACTTAAAGCACCTATTGGATTTGAGTCTGTTGAAGAAGCTATGCCAGAAGGGTTCAAAGAGAGGGTTCATGGAAGAGGCATTGTGCATGGGGTATGGAATGTTCAGCAGACATTAATTCTCGATCACCCCTCTATAGGGTGCTTCATTACCCATTGTGGAGCCTCATCTTTACTAGAGGCACTTGTGAACAAGTGTCAGCTTGTGATGTTACCAAATGTTCTTGATCAGATCTTTAATGCAAGGATGATGAGCAGCAGCTTTAAGGCTGGTGTTGAAGTGGAGAAAGGTGAAGAAGATGGTTTGTTCACAAAGGAGAGCGTCTGCAAAGCTGTGAAGACTGTGATGGATGATGAGAGTGAGGTTGGAAGGCAGGTTAGAGAAAATCATTTAAAATTGAGAAACATCTTAAGCAGCAAGGATTTGGAGAACACTTACAATGATAGTTTTTGTCACAAGCTGCAAGAATTACTTGGGGGATGA 1395 0.4301 MDAPQLQMHIAMYPWLAMGHITTYLHLANKLAKRRHRISFFIPKRTKAKVEHYNLYPHLITFIPITIPHVDGLPPQAETTFDVPLSLATLFMTAMDRTKKDIEPLLHELKPNVVFFDFALWIPSLARSLGIKSLQYITVNVMSVAFIESMKKQCQQNNLVEDDEMNLMNSPPAGFPDSSIKLHAHEVRGLASFMKLEVGGVSFMDHVCTGANLSDAVGFRGCREIEGQYAEFLESFYWKPLLLSGPGLPDPPNSTLEQKWAQWLARFNPGSVIYCAFGSECRMVQDQFKELLLGLELTGFPFLAALKAPIGFESVEEAMPEGFKERVHGRGIVHGVWNVQQTLILDHPSIGCFITHCGASSLLEALVNKCQLVMLPNVLDQIFNARMMSSSFKAGVEVEKGEEDGLFTKESVCKAVKTVMDDESEVGRQVRENHLKLRNILSSKDLENTYNDSFCHKLQELLGG 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01834 464 PANTHER GLYCOSYLTRANSFERASE 7 460 - -
Cca09g01834 464 CDD GT1_Gtf-like 8 446 IPR002213 GO:0008194
Cca09g01834 464 Gene3D Glycogen Phosphorylase B; 5 257 - -
Cca09g01834 464 Gene3D Glycogen Phosphorylase B; 258 441 - -
Cca09g01834 464 PANTHER ANTHOCYANIDIN 3-O-GLUCOSIDE 2''-O-GLUCOSYLTRANSFERASE-RELATED 7 460 - -
Cca09g01834 464 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 443 - -
Cca09g01834 464 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 340 424 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01834 Cca-Chr9 43075762 43077794 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01834 7 462 Glycosyltransferase AT5G54010 45.633 1.61e-149 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01834 K22794 - gmx:100808439 584.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01834 09 43075762 43077794 Cca09g01834 09 43075762 43077794 ECH