Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01833 ATGGACGCAGCACACTTGCAGTTGCACATAGCTATGTACCCATGGCTGGCCATGGGACACATAACGCCATATCTTCACCTTGCAAACAAATTAGCAACAAGAGGACACAAAATATCCTTTCTCATACCCAAACGAACAAAAGCAAAGGTGGAACATTTCAACCTCTATCCACACTTAATAACCTTCATCCCTATCACCATTCCCCCAGTTGATGGCCTTCCTCCTGATGCAGAAACCACTTCAGATGTTCCCTTTTCCTTAGGCTCACTTCTTATGACTGCCATGGAACGTACTGAGATGGACTTTAAACTACTTTTACTTGAGCTCAAACCCCACGTTGTTTTCTTTGATCTAGCGTCTTGGATACCTAGCTTGACTCGAAGCTTAGGCATCAAGTCTCTTCAGTACACAATCACTAGCATGATATCAGCAGCTTATGTGGAATCCATGGAGAACATGTGTCAAGAAAAGAACTTGGTTAGAGATGAGATGAATCTCATGAATAATCTACATGAATTCCCAGATTCTTCCATCAAGCTTCATGCTCATGAGGTTCGAGTATTAGCTTCATTCCTGAATTTAAAGTATGGTAGTGGTGTTCGTTTCGTGGATCGGATCCGCACTGGCGCCACACAGTCAGATGCTGTGGGATATAAAGGTTGTAGAGAATTTGAGGGAACATATGCTGAGTTTCTTGAGAGTTTTTATGGGAAGCCTTTTTTACTTTCAGGGCCTGTACTACCAGAGCCACCTACCTCCACTTTGGAAGAAAAATGGGCTCAGTGGCTTTCAGGATTCAAGCCTGGTTCAGTCATATACTGTGCGTTTGGAAGTGAATGGAGGCTAAACCAGAATCAGTTCAAGGAACTGTTGCTGGGTCTTGAGTTAACAGGTTTTCCATTTCTGGCAGCACTTAAAGCACCTATTGGATTTGATTCTGTGGAAGAAGCTATGCCAGAAGGGTTCAAAGAGAGGGTTCATGGAAGAGGCATTGTGGGGGTCCACCAGACATTAATTCTTGACCACTCATCTATTGGCTGCTTCATTACCCATTGTGGAGCCTCATCTTTACTAGAGGCACTTGTGAGCAAGTGTCAGCTTGTGGCGTTACCTAATATTCTTGACCAGATCCTTATTGCGAGGATGATAAGCAGCAGCTTGAAGGCTGGTGTTGAAGTGGAGAAAGGTGAAGAAGATGGTTCATTCACAAAGGAAAGTGTCTGCAAAGCTGTGAAGACTGTGATGGATGATGAGAGTGAGGTTGGAAGGGAGATCATTAATGCGAGGATGATAAGCAACAGCTTAAAGACTGGTGTTCAAATTGAGAGAGGAGAAGATGGTTTATTCACAAAGGAGAGTGTCTGCAAAGCTGTGAAGACAGTGATGGATGATGAGAGTGAGGTTGGAAGGGAGGTTAGAGCGAATCATTTAAAATTGAGAGACATCTTACTCAGCAAGGATTTGGACAACACTTACGTTGATAGTTTTTGCCACAAGCTCCAAGAATTACTTGGGTGA 1518 0.4348 MDAAHLQLHIAMYPWLAMGHITPYLHLANKLATRGHKISFLIPKRTKAKVEHFNLYPHLITFIPITIPPVDGLPPDAETTSDVPFSLGSLLMTAMERTEMDFKLLLLELKPHVVFFDLASWIPSLTRSLGIKSLQYTITSMISAAYVESMENMCQEKNLVRDEMNLMNNLHEFPDSSIKLHAHEVRVLASFLNLKYGSGVRFVDRIRTGATQSDAVGYKGCREFEGTYAEFLESFYGKPFLLSGPVLPEPPTSTLEEKWAQWLSGFKPGSVIYCAFGSEWRLNQNQFKELLLGLELTGFPFLAALKAPIGFDSVEEAMPEGFKERVHGRGIVGVHQTLILDHSSIGCFITHCGASSLLEALVSKCQLVALPNILDQILIARMISSSLKAGVEVEKGEEDGSFTKESVCKAVKTVMDDESEVGREIINARMISNSLKTGVQIERGEDGLFTKESVCKAVKTVMDDESEVGREVRANHLKLRDILLSKDLDNTYVDSFCHKLQELLG 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01833 505 Gene3D Glycogen Phosphorylase B; 3 261 - -
Cca09g01833 505 PANTHER ANTHOCYANIDIN 3-O-GLUCOSIDE 2''-O-GLUCOSYLTRANSFERASE-RELATED 7 425 - -
Cca09g01833 505 PANTHER ANTHOCYANIDIN 3-O-GLUCOSIDE 2''-O-GLUCOSYLTRANSFERASE-RELATED 424 502 - -
Cca09g01833 505 CDD GT1_Gtf-like 8 419 IPR002213 GO:0008194
Cca09g01833 505 Gene3D Glycogen Phosphorylase B; 262 424 - -
Cca09g01833 505 Gene3D Glycogen Phosphorylase B; 425 484 - -
Cca09g01833 505 PANTHER GLYCOSYLTRANSFERASE 7 425 - -
Cca09g01833 505 PANTHER GLYCOSYLTRANSFERASE 424 502 - -
Cca09g01833 505 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 336 419 IPR002213 GO:0008194
Cca09g01833 505 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 418 - -
Cca09g01833 505 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 426 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01833 Cca-Chr9 43068474 43072191 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01833 7 504 Glycosyltransferase AT5G54010 41.468 1.14e-135 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01833 K22794 - aprc:113859656 565.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01833 09 43068474 43072191 Cca09g01833 09 43068474 43072191 ECH