Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01445 ATGGCTTCAACCGCTCCTCATGAACATAGCCAAGTACAATCCAACAACAAAACGAGTTTCACAAGCGTGAAATCACTCACCGAATCACCAGAACTCACTTCCCTCCCACCCTCATACATCTTCACCACCAACTCAGATGAAGAAGATCATGAAATAGTATCAGAGCCAGATAAAGATGATCCAATCCCCATCATTGACTATTCCCTCTTGGTTCTTGGCACACCTCATGAACGTGCCAAGACCATCCATGACTTGGGCAGGGCTTGTGAGGAGTGGGGGTTCTTCATGCTCATCAATCACTCAGTGGCAAAGAGCGTCATGGAGAAAATGGTTGATCAAGTTTTTGCTTTCTTCAATCTTAGAGAGGAGGAGAAGCAAGAGTATGCAAGTAAGGATGTGATGGACCCTATAAGGTATGGCACAAGCTCCAATGTTTCAATGGACAAAGTCTTGTTCTGGAGGGATTTCCTTAAAATCGTGGTGCATCCAGAGTTTCACTCACCTGATAAACCACTAGGCTTCAGGGAGGCAGCAGCAGAGTACTGTAGAAGAACCTGGAAAGTGGGAAAGGAACTGCTGAAAGGAATATCAGAAAACTTGGGATTGGAAGCCAATTACATAGAGAATACAATGAACCTAGATTATGGTTTGCAAATGATAGCAGCAAATCTATATCCACCTTGTCCACAACCTGAGCTTGCAATGGGAATACCCCCACATTCTGATCACGGCCTCTTGAACATCCTCATGCAGAACGGGGTTAGTGGCCTTCAAGTGCTTCACAATGGCAAGTGGATCAACGTCACTTCTACTCCAAACTGTTTCTTACTCTTTGTATCTGATCACCTTGAGGTTGTGAGCAATGGCAAGTACAAGAGTGTATTACATCGAGCAGTTGTGAGCAACAAAGCTACGAGAATGTCCCTGGCAATAGTAATTGCACCATCCTTGGACACTGTGGTTGAACCAGCTAAAGAGTTGCTAGACGATGAAAGAAATCCAGCAGCGTACGTTGGGATGAAACATAGAGACTACATGCAACTTCAGCGAAGCAACCGGCTTGATGGGAAATCTGTGCTAGACAAAGTTAAAATCTGA 1098 0.4463 MASTAPHEHSQVQSNNKTSFTSVKSLTESPELTSLPPSYIFTTNSDEEDHEIVSEPDKDDPIPIIDYSLLVLGTPHERAKTIHDLGRACEEWGFFMLINHSVAKSVMEKMVDQVFAFFNLREEEKQEYASKDVMDPIRYGTSSNVSMDKVLFWRDFLKIVVHPEFHSPDKPLGFREAAAEYCRRTWKVGKELLKGISENLGLEANYIENTMNLDYGLQMIAANLYPPCPQPELAMGIPPHSDHGLLNILMQNGVSGLQVLHNGKWINVTSTPNCFLLFVSDHLEVVSNGKYKSVLHRAVVSNKATRMSLAIVIAPSLDTVVEPAKELLDDERNPAAYVGMKHRDYMQLQRSNRLDGKSVLDKVKI 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01445 365 MobiDBLite consensus disorder prediction 44 59 - -
Cca09g01445 365 Pfam 2OG-Fe(II) oxygenase superfamily 219 313 IPR044861 -
Cca09g01445 365 PANTHER FLAVONOL SYNTHASE/FLAVANONE 3-HYDROXYLASE 13 365 - -
Cca09g01445 365 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 13 365 - -
Cca09g01445 365 SUPERFAMILY Clavaminate synthase-like 23 357 - -
Cca09g01445 365 MobiDBLite consensus disorder prediction 1 43 - -
Cca09g01445 365 MobiDBLite consensus disorder prediction 1 59 - -
Cca09g01445 365 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 215 315 IPR005123 -
Cca09g01445 365 Gene3D - 18 354 IPR027443 -
Cca09g01445 365 Pfam non-haem dioxygenase in morphine synthesis N-terminal 62 169 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01445 Cca-Chr9 37750648 37753079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01445 56 365 Glycosyltransferase AT5G59530 34.985 5.16e-52 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01445 - - gmx:100818482 628.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01445 09 37750648 37753079 Cca09g01445 09 37750648 37753079 ECH