Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01378 ATGTTCGTCTCCCTCTTCTGCGCTCTCAAGGCTGCCTCCGATGGACACGTCAAGAAGTGGCGACCCGCTGGCGCTGACCGTGGATTCACCTTCCTCACTTACAATCTCACCATTGCTTACCACCGCACCAATCTTCTCGCTCGTTATGGTAGATGGTCAGCTACTGATGATGGTGGTGCCTTAGAAACTCTTGGATTCAGAGAGGGCTTTAGAGTTGATGTTGATGTTCCAGAAAGCACATGGGCGCAAGCCCTGAGTTTCCATGATATTCTAATTTTTAACACAGGGCACTGGTGGTGGGCACCTTCAAAATTTGACCCCACGAAGTCTCCTATGCTTTTCTTCAAGAAGGGTCAGCCAGTAATCCCTCCATTACGTCCAGATCAAGGCCTGGATATGGTTTTGAAGCATATGATCCCGTATGTGGAGGAAAACGCACGACCAGGTGCAGTCAAATTTTTCCGTACTCAATCACCCAGACATTTTGAGGGTGGCGACTGGGATCAGGGTGGTTCCTGTCAAAGGGATCGACCTTTAGCGGTAGAACAGGTTGAGGAACTTTTCTCTGTGAAAAATAACGGGACAAATGTGGAGGCCCGACTTGTGAATGAACACCTCTATAAGGCTCTAAAGGGGTCTAGTTTCATTATTTTGGACATCACTCACTTGAGTGAGTTCAGGGCTGATGCCCACCCTGCTTCAGCTGGAGGGAAAAAACACGATGATTGCATGCACTGGTGCTTACCTGGAATTACAGATACCTGGAATGACTTGTTCATAGAGCTTCTGAATAGAAAGATCAAGGGTAGAAGTTGA 816 0.4779 MFVSLFCALKAASDGHVKKWRPAGADRGFTFLTYNLTIAYHRTNLLARYGRWSATDDGGALETLGFREGFRVDVDVPESTWAQALSFHDILIFNTGHWWWAPSKFDPTKSPMLFFKKGQPVIPPLRPDQGLDMVLKHMIPYVEENARPGAVKFFRTQSPRHFEGGDWDQGGSCQRDRPLAVEQVEELFSVKNNGTNVEARLVNEHLYKALKGSSFIILDITHLSEFRADAHPASAGGKKHDDCMHWCLPGITDTWNDLFIELLNRKIKGRS 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01378 271 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 1 265 IPR029962 GO:0016413
Cca09g01378 271 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 13 1 265 IPR029968 -
Cca09g01378 271 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 2 261 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01378 Cca-Chr9 37012950 37016909 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01378 - - ccaj:109809670 575.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01378 09 37012950 37016909 Cca09g01378 09 37012950 37016909 ECH