Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01339 ATGGCCGTAGCTGAACCCAAGCCTCACTCCGAACCTAAGGTCTGGAACTTCTTCAAGCTTCCCTTCCGCCATTCCACCAACACGACGTCGTCTTCGTCTTCCGCTAACCTTcaccaccaccaccaccaccaccaccaccaccatcaccacAACCCTCACAATCTTCCTCTCGAGGGTTCCACTTCCCACACCTCGAATTCCGTTTCTTCCGTTGCGAGATCGCTTCTCCCAACACGACGTCGTCTCAAGCTTGATCCCTCCAACAAGCTTTACTTCCCTTATGAGCCAGGCAAACAGGTTAGGAGTGCCATCAGGATCAAAAACACCAGCAAATCTCATGTAGCTTTCAAGTTTCAAACAACTGCACCCAAAAGCTGTTTCATGCGTCCTCCTGGGGCTATCCTTGCACCTGGTGAGAGTATCATAGCAACAGTGTTCAAGTTTGTAGAGGTACCAGAAAATAATGAAAAGCCTGAAAAAACTGGACTCAAATTTAAAATCATGAGCTTGAAGGTGAAAGGATCAATTGATTACGTTCCTGAACTGTTTGAAGAGCAGAAGGACCAAGTAGCAGTGGAGCAGATTTTGCGAGTTATTTTTCTAGATCCAGAGCGTCCTAGTCCTGCTTTAGAGAAACTGAACCGACAGCTGGCTGATGCTGATGCTGCCCTTGAGGCGCGCAAGAAACCTGCCGAAGATGCAGGTCCTAAAATTATCGGGGAAGGGCTCGTCATAGATGAATGGAAAGAGAGGAGGGAAAGATATCTCGCAAAGCAGCAGGGTGAGGTGGTTGTAGATTCTGTATAG 807 0.4523 MAVAEPKPHSEPKVWNFFKLPFRHSTNTTSSSSSANLHHHHHHHHHHHHHNPHNLPLEGSTSHTSNSVSSVARSLLPTRRRLKLDPSNKLYFPYEPGKQVRSAIRIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGESIIATVFKFVEVPENNEKPEKTGLKFKIMSLKVKGSIDYVPELFEEQKDQVAVEQILRVIFLDPERPSPALEKLNRQLADADAALEARKKPAEDAGPKIIGEGLVIDEWKERRERYLAKQQGEVVVDSV 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01339 268 MobiDBLite consensus disorder prediction 36 52 - -
Cca09g01339 268 ProSiteProfiles Major sperm protein (MSP) domain profile. 81 201 IPR000535 -
Cca09g01339 268 MobiDBLite consensus disorder prediction 55 74 - -
Cca09g01339 268 Pfam MSP (Major sperm protein) domain 82 191 IPR000535 -
Cca09g01339 268 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 40 260 IPR016763 GO:0005789
Cca09g01339 268 PANTHER VESICLE-ASSOCIATED MEMBRANE-PROTEIN-ASSOCIATED PROTEIN-RELATED 40 260 - -
Cca09g01339 268 MobiDBLite consensus disorder prediction 28 74 - -
Cca09g01339 268 SUPERFAMILY PapD-like 70 211 IPR008962 -
Cca09g01339 268 Gene3D Immunoglobulins 77 205 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01339 Cca-Chr9 36403258 36407848 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01339 - - gmx:100808835 453.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01339 09 36403258 36407848 Cca09g01339 09 36403258 36407848 ECH