Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01261 ATGTTAGGAATTTTCAAGGAGAAGTTGGTGAATCCACCACAAGAGCTCAACAGTCCAGCTTCTTTGGATACATCAATAAGGTCTAAACTTCCAAATGAAATCATTAAGGAATTCATATCCTACAATCCCTCCAAAGCTTTCTCCATGAGCTTTGGAAATGATGCTTTGCTAGCTTTTTCCCCTTCAAACAAGCCCTTCATTCATCAAGGGTTTTGTGTTTTGGATGACATATACTGCATGTTCCTTGGGGGCCTAAACAACCTAAGCATGCTTATCAAGCAGTATGGCCTATCAAAGGGAACCAATGAAGCTATGTTCATCATAGAAGCCTATAGGACTCTTCGTGATAGGGGTCCATACCCTGCTGATCAGGTCCTCAAAGACCTTGAAGGGAGTTTTGGATTTGTGATCTATGACAATAAGGATGGAACTGTTTTTATTGCATTGGGTTCTAATGGAAAGATTGGACTTTTCTGGGGCATTGCAGCTGATGGTTCTGTAGTTATTTCTGAGAATTTGGAGCTTATAAAAGCCAGCTGTGGTAAATCATTTGCACCATTCCCCACTGGGTGTATGTTTCATAGTGGACATGGTCTAATGAGCTATGAGCATCCAACAAGGAAGATGAAGCCAATGGAAAGAGTTGATAGTGAGGGGGTGATGTGTGGATCCAACTTTCTTGTCGATCCCCAATCAAGGAAGTCAATGATGCCACGTGTTGGAAGTGAAGCAAATTGGGCTGCTTGGGGCCCACAAGCCTGA 762 0.4265 MLGIFKEKLVNPPQELNSPASLDTSIRSKLPNEIIKEFISYNPSKAFSMSFGNDALLAFSPSNKPFIHQGFCVLDDIYCMFLGGLNNLSMLIKQYGLSKGTNEAMFIIEAYRTLRDRGPYPADQVLKDLEGSFGFVIYDNKDGTVFIALGSNGKIGLFWGIAADGSVVISENLELIKASCGKSFAPFPTGCMFHSGHGLMSYEHPTRKMKPMERVDSEGVMCGSNFLVDPQSRKSMMPRVGSEANWAAWGPQA 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01261 253 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 63 197 IPR029055 -
Cca09g01261 253 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 55 203 IPR029055 -
Cca09g01261 253 Pfam Aluminium induced protein 2 228 IPR024286 -
Cca09g01261 253 PANTHER ALUMINUM INDUCED PROTEIN WITH YGL AND LRDR MOTIFS 1 251 IPR044828 -
Cca09g01261 253 SMART DUF3700_2 2 228 IPR024286 -
Cca09g01261 253 PANTHER NUCLEOPHILE AMINOHYDROLASE-RELATED 1 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01261 Cca-Chr9 35056066 35058191 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01261 - - gmx:100776430 447.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01261 09 35056066 35058191 Cca09g01261 09 35056066 35058191 ECH