Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01248 ATGGAACTTGTTCCATACTCCGACCCATCAACCTCCACCACCCCAGCATGGCAGGACATGTTCCGATCCGCCTCCACCCGCCACCCCTCCTCCCACGCGCCTCCCTCCCAACCCCACGCGCCGCCGAATCCGCCCTCCGGCAATGACCCAGATGGAAAAAACACATTTTCCGGCGACCCACAAGTGCGCCTAGCCCTTTACATAGCCATGGCCCACGCGGGTCTGGCCTTCGCCATTTTCATCCTTTACACCTTCTCGAAGCTTCTGGAACAGTACCTGAGACCCCTCCAATGGGCCATACTGTGTTCCATCCCTCTCAGAGGCATTCAGCAGACCCTAGTTTCGTTTTGGTCCGAACCCCTCCATCTGGGTCTCACCGAAACCCTCCTCGCTGTTCCCGTTGCTGTGTTTAGGGTTTTCGTTGGCACACTCGTTGAGCTTCGTGAGGCTTCCTTCAGAGTCCTTTTGAGAAGACCAAAGCCTCAGCAGACTCACCCTTCAAGGAAAAGAAGTGGGTTTTCCAAGTTGCTTCGTTTGCTTGTGTCGTTTGGGGTTTTCATTATTGCTTATGAGAGGCTTGGTGGGTTTGGAGCACTGTCACTTTTGGGGTTAGGGTTTATGTTTAGTTCGAGCAATGTTGATTCCACTATGCACACTTTGTCTTCCTTCAGGAGCATTAGCTTCAGGCGTAGTAAAATTAGTGCCTTTTTCACTAGGGGGATATTGAGGAGGTTGAAGATTATTGTGGCGGTTGGGCTTATTGTTGGCATGATTGTGGGGTTTTTGAGTGGGGTGATTTTCTTCTCTTATAAGATTGGGGTTGAGGGAAAGGATGCTGTGATATCATTGAAGCTGCATGTGGAGGAGAGCAATTATGCTGAGAGGATTGGTGTGAAGAAATGGATGGATGAGAATGATGTTGCTGGGATGGTGGATAGTTACACTACTAAGATATATGAGACTGTGTCTGATCAGATAGATGGCTTGGCTGTGCAGTATAACATGACTGAATTTGTCACTGGCATTAAGCATTTCGTGATATCTGGCTCCGGCAACTCTTCAGCGCCTTCCAAGGCCATGATGACTCCCTCTCCTTATGCGGATAAGTTCTTGAGCTTGAAGAACCGGGTTAAGAACCGCGAATGGAACCAGATTTACACAGAGGTTGATTCGCTTTTGCGGGAGCATGTGATCACTCGTGAGGATTTGGTTGAGAAGGCCAAAGGTTTTGCCTTCAAAGGAGTCGATGTGTTTCAGCAGATTTTTGCTAGTAGTAGAACTGTTCTTGGAGGCAGTACTAAGTTTGTGTTCTCCATTGCGAATTCCATAATCTCAGGAGCTGCAGAGGTTTTCAATTTTGTGTCTCAGACGATGGTGTTCATTTGGGTTTTGTATTACCTCATCACATCGGAGTCTGGTGGAGTGACAGAGCAAGTGATGTACATGCTCCCAATTTCAAACTCCACCAGGATCAGATGTGTTGAGGTTTTGGACAAAGCTATTTCAGGAGTACTTTTGGCCACTGCTGAGGTTGCATTTTTCCAAGGGTGTCTTACTTGGCTTTTGTTTAGGTTGAACAAAATACACTTCTTGTACATGTCAACTGTGCTTGCCTTTATTAGTCCTTTGTTGCCAATATTTCCATCTTGGCTTGCAACAATTCCAGCAGCAGTGCAACTAGTGCTGGAAGGAAGATACATAATTGCCATTTTCTTGTCTATTATTCACCTTTTTCTCATGGACTATGGTGCATCGGAGATTCTAGAAGATGTGCCTGGGAATAGTGCCTATCTCACTGGGCTCAGCATCATTGGGGGAATGACATTGTTCCCATCTGCTCTGGAGGGAGCTATCATGGGACCATTAATAACTACTGTCATGATTGCACTGAAAGATTTGTATGCTGAATTTCTTTTGCAAGAACCTAAGGACAACGACAAGCAGAAAGCCAGCTAG 1956 0.4693 MELVPYSDPSTSTTPAWQDMFRSASTRHPSSHAPPSQPHAPPNPPSGNDPDGKNTFSGDPQVRLALYIAMAHAGLAFAIFILYTFSKLLEQYLRPLQWAILCSIPLRGIQQTLVSFWSEPLHLGLTETLLAVPVAVFRVFVGTLVELREASFRVLLRRPKPQQTHPSRKRSGFSKLLRLLVSFGVFIIAYERLGGFGALSLLGLGFMFSSSNVDSTMHTLSSFRSISFRRSKISAFFTRGILRRLKIIVAVGLIVGMIVGFLSGVIFFSYKIGVEGKDAVISLKLHVEESNYAERIGVKKWMDENDVAGMVDSYTTKIYETVSDQIDGLAVQYNMTEFVTGIKHFVISGSGNSSAPSKAMMTPSPYADKFLSLKNRVKNREWNQIYTEVDSLLREHVITREDLVEKAKGFAFKGVDVFQQIFASSRTVLGGSTKFVFSIANSIISGAAEVFNFVSQTMVFIWVLYYLITSESGGVTEQVMYMLPISNSTRIRCVEVLDKAISGVLLATAEVAFFQGCLTWLLFRLNKIHFLYMSTVLAFISPLLPIFPSWLATIPAAVQLVLEGRYIIAIFLSIIHLFLMDYGASEILEDVPGNSAYLTGLSIIGGMTLFPSALEGAIMGPLITTVMIALKDLYAEFLLQEPKDNDKQKAS 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01248 651 PANTHER TRANSMEMBRANE PROTEIN C9ORF5 PROTEIN 1 645 - -
Cca09g01248 651 MobiDBLite consensus disorder prediction 1 33 - -
Cca09g01248 651 MobiDBLite consensus disorder prediction 34 48 - -
Cca09g01248 651 MobiDBLite consensus disorder prediction 1 55 - -
Cca09g01248 651 PANTHER TRANSMEMBRANE PROTEIN 1 645 IPR002549 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01248 Cca-Chr9 34736791 34740408 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01248 - - gmx:100819024 1098.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01248 09 34736791 34740408 Cca09g01248 09 34736791 34740408 ECH