Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01247 ATGGAAATTGGGAGAGAGGATGAGATTGTGGACATGTCATCAATGTCACCCCCATTTGTTGGTTCCAATAACCATGACTTTTGTCACAGAAAAGAGTTCATGTCTCAGGCATATCTTCAGAATAAGTACTCAGAGATTGACATACAAATTGAAGGTTCCAATTTGGAACAAAATCGCCCTCTCCCCATATTTCTCAAGTTTGAAGATGTGGAGTATAAGGTGAGAAATAGTCAAGCAAACTCTAGCAACCTTGTGAAGACAATGGTGTCAAAGGTATCCACACAGCACACTGTGGAAGAAGATAGATATAAGAGAATTTTGAAGGGCATCACAGGAAGCATTGGTCCTGGTGAAATTCTTGCTCTGATGGGTCCTTCTGGCAGTGGGAAGACAACTTTGTTGAGAGTTATAGGAGGAAGACTAGTTGACAATGTAAAGGGAAAAGTAACTTACAATGATGTTCGTTTTACTCCAGCTGTCAAGAGGAGGATTGGATTTGTGACACAAGAGGATGTGCTTTTCCCACAATTAACTGTTGAAGAAACATTAGTCTTCTCTGCACTCTTGAGGCTACCAAATAGTATGAGCAAGGAGCAAAAATATGCAAGAGTGGACACCACTATCAAGCAGCTTGGCCTTGAAAGATGTCGCAAAACAAAAATAGCTGGAGGATATCTCAAAGGCATATCAGGAGGAGAAAGGAAGAGAACCAGCATAGGCTATGAAATTCTTGTTGATCCTTCATTATTGCTGCTTGATGAACCAACTTCTGGCCTTGACTCCACCTCAGCAAACAAACTTCTTCTTACTCTTCAAGGACTTGCTAAGGCTGGAAGGACCATAATCACAACAATACACCAGCCATCCAGCAGAATCTTTCACATGTTTGACAAACTTCTTTTAATATCTGAAGGCTATCCTGTGTACTATGGGAAGGCTAAAGACACAATGGAGTACTTTTCATCCTTGAGATTCTCCCCACAAATATCAATGAATCCTGCAGAGTTCTTGCTTGACTTAGCAACTGGACAAGTGAATGATATAAGTGTTCCATCAGATATCTTGCAAAATCAAGAATCTGGTGACCCTGCAGAAGCTGTTATTAAATATCTACAACTCAAATACAAAACTCTATTGGAGCCAAAAGAAAAAGAAGCGAATCATAGAGAAGTAAACACACCAGAACATCTTCAACTAGCCATACAGGTTAAGAAGGAGTGGACATTGAGTTGGTTGGACCAATTTGTGATTCTTTCCAGGAGAACATTTAGAGCAAGATGCAAGGACTATTTTGATAAGCTAAGGCTAGTTCAAGCACTTGGAATTGCACTTTTGTTGGGGCTACTTTGGTGGAAATCTTCAACCAATACTGAAGCTCAACTCAGAGATCAGGTTGGTTTAGCATTCTACATATGCATATTCTGGACCTCTTCATGTATTTTTGGGGCAGTCTATGTCTTTCCATTTGAAAAGTACTACTTAATAAAAGAAAGGAAAGCTGACATGTATAGATTGAGTGTGTACTATGCATGTAGCACTCTATGTGACATGGTGGCACATGTTTTGTATCCTACATTTTTCATGGTCATCTTGTACTTCATGGCTGGCTTTAAGAGGACTGTTGTTTGCTTCTTCATGACACTATTCACAATTCTGTTAATAGCTATAACAAGTCAAGGGGCAGGAGAATTGTTTGGAGCTTCAATTATGAGTATTCAAAGAGCAGGGACTGCTGCTTCTTTGATACTAATGTTATTCCTTCTTACAGGTGGCTACTACGTCCAGCACATACCAAAGTTCATGAGGTGGTTGAAGTATTTGTCCTTCATGTACTATGGCTTCAGGCTGCTCCTAAAAGTGCAGTATTCAGGAGACCAACTATATGATTGTGAAAGTATGGGAGGGTGCAGGACCCTGCAGAGTTCACCTACATTTGACATTGTAAACTTAAAAGGTGGGTTAAAAGAAGTGTGGATTCTGCTAGCCATGGCCTTCATCTTTAGGTTGTTAGCATATTTGTGCCTCCGCAGAAGAATTGATAGTTGCAACTAG 2052 0.4016 MEIGREDEIVDMSSMSPPFVGSNNHDFCHRKEFMSQAYLQNKYSEIDIQIEGSNLEQNRPLPIFLKFEDVEYKVRNSQANSSNLVKTMVSKVSTQHTVEEDRYKRILKGITGSIGPGEILALMGPSGSGKTTLLRVIGGRLVDNVKGKVTYNDVRFTPAVKRRIGFVTQEDVLFPQLTVEETLVFSALLRLPNSMSKEQKYARVDTTIKQLGLERCRKTKIAGGYLKGISGGERKRTSIGYEILVDPSLLLLDEPTSGLDSTSANKLLLTLQGLAKAGRTIITTIHQPSSRIFHMFDKLLLISEGYPVYYGKAKDTMEYFSSLRFSPQISMNPAEFLLDLATGQVNDISVPSDILQNQESGDPAEAVIKYLQLKYKTLLEPKEKEANHREVNTPEHLQLAIQVKKEWTLSWLDQFVILSRRTFRARCKDYFDKLRLVQALGIALLLGLLWWKSSTNTEAQLRDQVGLAFYICIFWTSSCIFGAVYVFPFEKYYLIKERKADMYRLSVYYACSTLCDMVAHVLYPTFFMVILYFMAGFKRTVVCFFMTLFTILLIAITSQGAGELFGASIMSIQRAGTAASLILMLFLLTGGYYVQHIPKFMRWLKYLSFMYYGFRLLLKVQYSGDQLYDCESMGGCRTLQSSPTFDIVNLKGGLKEVWILLAMAFIFRLLAYLCLRRRIDSCN 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01247 683 Pfam ABC-2 type transporter 286 347 IPR043926 GO:0140359
Cca09g01247 683 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 104 321 IPR027417 -
Cca09g01247 683 Pfam ABC-2 type transporter 414 622 IPR013525 GO:0016020|GO:0140359
Cca09g01247 683 SMART AAA_5 116 307 IPR003593 -
Cca09g01247 683 CDD ABCG_EPDR 82 311 - -
Cca09g01247 683 Pfam ABC transporter 107 257 IPR003439 GO:0005524
Cca09g01247 683 Gene3D - 89 324 IPR027417 -
Cca09g01247 683 PANTHER ABC TRANSPORTER G FAMILY MEMBER 26 4 679 - -
Cca09g01247 683 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 92 329 IPR003439 GO:0005524
Cca09g01247 683 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 4 679 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01247 Cca-Chr9 34725175 34731963 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01247 105 290 Calmodulin-binding Proteins AT2G36910 30.732 4.27e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01247 K05681 - gmx:100806094 1219.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01247 09 34725175 34731963 Cca09g01247 09 34725175 34731963 ECH