Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01235 ATGAAACTGGGGCTATCAAATTTTGCCACTGCAGCTGTAATCTTGTCCAGCCTGAATGCAGTGGTTGGGATCAGATTTGTGATTGACAGAGAAGAATGTTTCTCTCATAATGTTCAGTATGAAGGGGATAAAATCCATGCTTCATTTGTTGTCATCAAGATTGATACAGCTTGGCAATATACTCATGATGGTGTAGACGTCACGGTGAAGGGACCTACTGGTGAAGGAATTCTAGATTTTCATGACAAGACAAGTGAAATATTTGAATTTGTGGCTCGAAACAGTGGACCCCATCGCTTCTGCTTCAGCAACAGGTCTCCCTATCATGAAACAATTGATTTTGATGTCCACTCTAACCAAGCTCACAACTCTGATCAGCATGCAAAAGATGAGCATTTTAATCCTTTGTTGGAACAGATAATAAAGTTAGAGCAAGCTCTTTTCAACATTCAGTATGAACAGCATTGGCTTGAAGCTCAGACTGAACGCCAGGCAATAGTAAGCAATGCAATGAGCTCCAGAGCAATTCATAAGGCCTTACTTGAATCAGCAGCACTAGTGGCTGCCAGCGTCCTCCAAGTTTATCTTCTTCGTTGCCTCTTTGAGAGAAAGCTTGCAATATAG 624 0.4167 MKLGLSNFATAAVILSSLNAVVGIRFVIDREECFSHNVQYEGDKIHASFVVIKIDTAWQYTHDGVDVTVKGPTGEGILDFHDKTSEIFEFVARNSGPHRFCFSNRSPYHETIDFDVHSNQAHNSDQHAKDEHFNPLLEQIIKLEQALFNIQYEQHWLEAQTERQAIVSNAMSSRAIHKALLESAALVAASVLQVYLLRCLFERKLAI 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01235 207 Pfam emp24/gp25L/p24 family/GOLD 30 202 IPR009038 -
Cca09g01235 207 SMART EMP24_GP25L_2 23 202 IPR009038 -
Cca09g01235 207 PANTHER EMP24/GP25L/P24 FAMILY/GOLD PROTEIN 2 205 - -
Cca09g01235 207 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 2 205 IPR015720 -
Cca09g01235 207 ProSiteProfiles GOLD domain profile. 31 118 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01235 Cca-Chr9 34572880 34575707 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01235 - K20347 gmx:102665223 335.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01235 09 34572880 34575707 Cca09g01235 09 34572880 34575707 ECH