Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01219 ATGAATGGGCATGTTTTTAACGGGAGGTCGTGTGTTGTTGCGTTTGCATCGCCTTTTACGGTTAAGAAAATGGGGGAGGCTCAGATAAATAGGAATCAGCAGATGAATCCATCTGCTGCTCCACAGGGAAGGAGGGGGCCTGCTGATGCAGGGGCTAAGCCTGGTGGGAGCAATATTTCAACGGGTGGTAATTACCAAGGTGGAGATGGGAATAGAGGTTATGGGAGAGGAGGTAACTGGGGGAGGGGGAATAATAATGCCATGGGGAATCGGGGGCCTGTTAATCCAATGAGGAATAGGGGTGGGGGGATGGGTGGCAGAGGTATAATGGGTCATGGTGGAAATGGATTTGGGCAGGGTATGGGTGGTACTCCACCACTGTTGCATCCTCAGTCAATGATGAATCAGGGTTTTGATCCTGCATTTGGTGGTCCCATGGGTAGAATGGGCAATTATGGAGGCTTTCCCGGTGCTCCAACACCACCATTCTCTGGTATTTTACCTTCATTCCCTGGTGTGGGAGGTGTTGGTTTGCCTGGAGTGGCACCTCATGTCAATCCGGCATTTTTCGGAAGAGGGATGCCTGTGAATGGTATGGGGATGATGCCCACATCTGGCATGGATGGTCCTAATATGGGAATGTGGTCCGATCCGAATATGGGTGGATGGGGTGGTGAAGAGCCTGGTGGTGGTAAGGCTGGAGAGTCAAGTTATGGGGAGGAAGCTGCATCAGATCATCAGTATGGTGAGGTGAGTCATGATAGAGCTGGGTGGCCTATGAGGGAAAAAGATAGAGGGTCGGAAAGGGACTGGTCTGGTTCTTCTGAGAGAAGGTATAGGGATGATAGAGATCAAGGATATGAGAGAGATGCACCTAGAGAAAAAGATGTGGCCCATGACCATGAATGGTCTGAAAGAAGGCATCgcacagagaAGATAGGGACAGGTATGCAGATCATCATAGGTATAGAGACCGGGAAGCAGAGCATGATGATGAGTGGGAGAGGGGACGGTCATCAAGGACTCACAGCAAGTCACGGTTATCACAAGAGGAGGAACACCATTCTAGGTCGAGAGATGCTGATTATGGGAAGAGGCGGCGGCTTACTTCTGAATAACTTTTGGCCCAGAAGTTTTTGA 1140 0.4974 MNGHVFNGRSCVVAFASPFTVKKMGEAQINRNQQMNPSAAPQGRRGPADAGAKPGGSNISTGGNYQGGDGNRGYGRGGNWGRGNNNAMGNRGPVNPMRNRGGGMGGRGIMGHGGNGFGQGMGGTPPLLHPQSMMNQGFDPAFGGPMGRMGNYGGFPGAPTPPFSGILPSFPGVGGVGLPGVAPHVNPAFFGRGMPVNGMGMMPTSGMDGPNMGMWSDPNMGGWGGEEPGGGKAGESSYGEEAASDHQYGEVSHDRAGWPMREKDRGSERDWSGSSERRYRDDRDQGYERDAPREKDVAHDHEWSERRHRTEKIGTGMQIIIGIETGKQSMMMSGRGDGHQGLTASHGYHKRRNTILGREMLIMGRGGGLLLNNFWPRSF 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01219 379 MobiDBLite consensus disorder prediction 246 307 - -
Cca09g01219 379 MobiDBLite consensus disorder prediction 33 99 - -
Cca09g01219 379 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 6-LIKE 1 310 - -
Cca09g01219 379 MobiDBLite consensus disorder prediction 210 307 - -
Cca09g01219 379 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFIC FACTOR 1 310 IPR034772 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01219 Cca-Chr9 34319517 34320846 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01219 K14398 - gmx:100782869 507.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01219 09 34319517 34320846 Cca09g01219 09 34319517 34320846 ECH