Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01157 ATGGGTTTCTCAGTGGCAGCTTCGTTGGGTACCCATGTTGTGCTTAGAGACACTCATCAAACAAAATTCAAGTGCCAATTTTTGTGCGGAACAGAACAGAATAATAGAATTGGTTTTGAATTTTCAAAGCACAAGGGCATCCATAGAGCAATTTTTGTTAGCAAGCAAGAGTTCACTGAGTTGGATGAGAGGAAGAGCCCTGACGAGGTTAAAGAAGAGATTAAAAAATGTTATGAACTCATAAACAGATTAGGGAGAGGAGCTCTGTATCTGGGTTCTTCAAGGTTGGGACCAAGCCATGCACATTACGTGCAAGCACAAGGGCTGGCTAAAGAGGCAACAAATCTTTTGGACTGCACTTCTTGGTCAGGGGCTGGACCAGGGCTAATGGACGCTGTTACTCAAGGTGGCATGCTAGCAGGAAAACCAGTTGGTGGGTTCAAGATAGGAAAAGAAGCTGGGGAGTGGACAGCATCTAATTTTCATCCATACTTACCATCAGAAAATTACCTCACGTGCAGATTTTTCTCTGCACGGAAGCATGGGCTGGTGGATGCTGTAGTGAGGAACAATTCATTTGATAAGACTGCTGTTGTTGCCCTTCCTGGTGGGATTGGTACTCTAGATGAGATGTTTGAGATACTGGCACTGATTCAGCTGGAACGGATTGGATCAGAGCTTCCCGTTGTTGGTTGGTACTCTAGATGTGTTGTTTGA 717 0.4463 MGFSVAASLGTHVVLRDTHQTKFKCQFLCGTEQNNRIGFEFSKHKGIHRAIFVSKQEFTELDERKSPDEVKEEIKKCYELINRLGRGALYLGSSRLGPSHAHYVQAQGLAKEATNLLDCTSWSGAGPGLMDAVTQGGMLAGKPVGGFKIGKEAGEWTASNFHPYLPSENYLTCRFFSARKHGLVDAVVRNNSFDKTAVVALPGGIGTLDEMFEILALIQLERIGSELPVVGWYSRCVV 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01157 238 Gene3D - 67 234 - -
Cca09g01157 238 Pfam Possible lysine decarboxylase 130 230 IPR031100 -
Cca09g01157 238 PANTHER EXPRESSED PROTEIN 1 230 - -
Cca09g01157 238 PANTHER EXPRESSED PROTEIN 1 230 - -
Cca09g01157 238 SUPERFAMILY MCP/YpsA-like 89 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01157 Cca-Chr9 32848365 32851054 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01157 - - gmx:100803538 411.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01157 09 32848365 32851054 Cca09g01157 09 32848365 32851054 ECH