Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01145 ATGGCACAAACTAGAGGCAACGCTTTGGTGCAATGGCTAGTAGCAACAATGTTCATTATTACCATGTTGGGTGGTGCCAAAGCTGTTCTTTTATGTGACATAGAGTCAAGTAAGCTAAGCTTATGCTATGCAGCAGTTACTGGGAAACACCCTCCAAAACCCAATGCAAAATGCTGTCAAGTTAATAAACATGCCAATTTGCCTTGCCTTTGCAGTTACAAGTCTATTCTACTTTCAGTTGGAATCAACCCCGCCAATGCTTTGGCCTTGCCCAGTAAATGTGGTCTGGAAACACCACCTGAATGTAAAGGTAATCTTATCTAA 324 0.4198 MAQTRGNALVQWLVATMFIITMLGGAKAVLLCDIESSKLSLCYAAVTGKHPPKPNAKCCQVNKHANLPCLCSYKSILLSVGINPANALALPSKCGLETPPECKGNLI 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01145 107 CDD nsLTP_like 32 100 IPR044741 -
Cca09g01145 107 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 32 102 IPR036312 -
Cca09g01145 107 Pfam Probable lipid transfer 20 101 IPR016140 -
Cca09g01145 107 PANTHER LIPID TRANSFER PROTEIN 1 103 - -
Cca09g01145 107 PANTHER LIPID BINDING PROTEIN-RELATED 1 103 IPR039265 GO:0005504|GO:0009627
Cca09g01145 107 Gene3D - 28 102 IPR036312 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01145 1 104 Acyl Lipid Metabolism Gene Families AT5G55410 33.645 7.27e-17 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01145 - - gmx:100812796 168.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01145 09 32752717 32753040 Cca09g01145 09 32752717 32753040 ECH