Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01141 ATGGGGTTCTTGGTGACGACGCTGATCTTCGTTGTGATCGGAATCATCGCGTGCCTCTGCACCAGAATTTGCTGCAACAGAGGACCTTCTACCAATCTATTTCACTTAACTTTGGTAATTACTGCAACAATTTGCTGCTGGATGATGTGGGCGATTGTATATCTGGCACAGATGAAACCACTCATTGTACCTATACTGAATGAGGGAGATCCGTTGCTGAAAGAGGTAGTGAATAAATTGAAGGGCATGGTAACCCCATCGTGGAAAGTGATGGCATCAGATGGAACGGTTAGTGATGTGAACTCTGCTCCTGTAGGCCCCTCCTCTCCTCCGTCCACCACCGTTTGCCTTCTTCTCTCTGCCGCCAACACTGCTTGTGGTGCCTTCACCGGCTCCCTTTATGGCTATGGTGCCGGATTGATTAAGAAGAAAGGCTTTACAGGATCCTTTAAAGAAGCAGGATCTAACGCTAAGACATTTGCAATTTTATCTGGCGTTGATAGTTTGGTTAACTGCATCTTGGCAAGACTTCGAGGAAAGGAAGATGCCATTAATGCTGGTTTAGCTGGATGTTGCTCTGGTCTTGCTACAAATTTTCCTGGTACACCCCAAGCACTTCTACAGAACTGCCTCACTTTTGGAGCTTTTTCTTTCATCATTGAAAGGGACCACCACACccgccccaacgccgcctccgcctccgccggcgacgGGGCCACAATTAAAGTGGTCAGGCACCCCAGGGGCCGCCCTCCCGGCTCCAAAAACAAGCCCAAACCGCCACTCGTTATAACCCGGGAACCCGAGCCCGCTATGACCCCTTTTATTTTAGAAATCCTGGGCAGAAGCGACGTGGTCGAGGCCCTGGCCCGGTTCAGCCGTAGAAAGAACACGGGCCTATGCGTCTTGTACGATTCAGAAACCGTCACCAATGTCACTCTTCGTCAACCCTCCGTCACCCCGGCGCCACCGTCACTTTCCACGGCTGCTTTGATGTCCTCTCCCTCTCCCCACGCTCCTCCTCCACGACTCGCCGGCAATCGCGCTCTCAGCCTTCGCCGTCTCACTCGCCGGCCCGCAGGGCCAGATCATGAAGCCAGAAAGATTCCAAAAAAAAAAACATGA 1125 0.4942 MGFLVTTLIFVVIGIIACLCTRICCNRGPSTNLFHLTLVITATICCWMMWAIVYLAQMKPLIVPILNEGDPLLKEVVNKLKGMVTPSWKVMASDGTVSDVNSAPVGPSSPPSTTVCLLLSAANTACGAFTGSLYGYGAGLIKKKGFTGSFKEAGSNAKTFAILSGVDSLVNCILARLRGKEDAINAGLAGCCSGLATNFPGTPQALLQNCLTFGAFSFIIERDHHTRPNAASASAGDGATIKVVRHPRGRPPGSKNKPKPPLVITREPEPAMTPFILEILGRSDVVEALARFSRRKNTGLCVLYDSETVTNVTLRQPSVTPAPPSLSTAALMSSPSPHAPPPRLAGNRALSLRRLTRRPAGPDHEARKIPKKKT 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01141 374 MobiDBLite consensus disorder prediction 229 266 - -
Cca09g01141 374 MobiDBLite consensus disorder prediction 316 334 - -
Cca09g01141 374 Pfam ATP synthase subunit H 3 67 IPR008389 GO:0033179|GO:0046961|GO:1902600
Cca09g01141 374 Pfam Tim17/Tim22/Tim23/Pmp24 family 125 217 - -
Cca09g01141 374 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22 105 234 IPR039175 GO:0042721|GO:0045039
Cca09g01141 374 PANTHER CHLOROPLASTIC IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22-2-RELATED 105 234 - -
Cca09g01141 374 MobiDBLite consensus disorder prediction 316 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01141 Cca-Chr9 32619169 32628721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01141 91 221 Miscellaneous Gene Families AT4G26670 58.779 7.81e-48 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01141 K17790 - gmx:102666951 192.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01141 09 32619169 32628721 Cca09g01141 09 32619169 32628721 ECH