Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01130 ATGGCCGACACCACCGCCGGCGCGACGGCGCTGTTGGAGCGGCGAGGGAAGTTTAGCCGCAGCGTGTCGCACGTGAACGACGAGTTCCACACGTTCCGCTCCTACCTCCGGTGGATGTGCGTGGACCAGTCCAACCCCTTCACGGCGGTCGTGTCCTGGTCGGTCTTCCTCCTCCTGGCGGTGGCCGTCCCCGCCGCCTCCCACTTCCTCCTCGCCTGCCCCTCCTGCGACGGCCGCCACTCCCGCCCCTACAACGCCGTCGTGCAGCTCTCCCTCACCGCCGTTTCCACCCTCTCCTTCCTCTGCCTCGCCGCCTTCGTCCGCCAGTACGGCCTCCGGAGGTTCCTCTTCTTCGACAAGCTTTGCGATGAGAGCGAAACTGTCAGAACCAACTACATGGCACACCTCAATAGGTCATTGAAGATTATTTCGGTGTTTGTGGGGCCATGTTTCGTGGCGGAGGGTGCATACAAGATATGGTGGTACGCATCTGGAGCCTCGCAAATCCCATTCCTGGGGAACGTGTACGTCAGCGATTCGGTAGCGTGCATACTGGAACTGTGGTCGTGGCTGTACCGGACGACGGTGATCTTCATCGTGTGCGTTCTGTTCCGTCTGATCTGTCACCTCCAGATCCTGCGGCTGCACGACTTCGCGAGATTCTTCCACGTGGACTCGGACGTGGCTTCTGTGATGTCGGAGCACCTTAGGATCAGGAGGCACCTGCGAATCATTAGCCACAGGTTCCGCGCGTTCATCCTACTCGCGCTGCTATTGGTCACTGGAAGCCAGTTGGCGTGCCTCCTGGTCACAACCAAGCATCCACACGATATGAACATCTACAAAACCGGTGAGCTGGCGCTGTGCTCAGTGACGCTCCTTTCGGCGCTGTGCATCttgttgcggagtgcgacgaagataacgcacaaggcgcaagcgatcacagggcttgctgccaagtggcacgtgtgtgcgacGTTGGATTCTTTTGATGGAGTAGCGATGGAAGGTGAGACACCAATGGCTCCTCAGAGTTCCCATGAAACAGTTTTTCCTAATGTGGGAACAGATGGGGAATCGGAGACCGATGAAGCAGGTGATGAAGAAGATGAAATTGATGATACCAAGTTCATCCCATCCTATGCTTATAGCACCATATCATATCAGAAGAGACAAGCTCTTGTAAATTACTTTGAGAATAACAGAGCAGGGATTACGGTATATGGATTCATGTTGGATAGGAGTACGCTCCACACGATATTCGGCATTGAAATGTCACTAGTTCTTTGGCTTCTCGGGAAAACCATTGGCTTCTCTTGA 1320 0.5197 MADTTAGATALLERRGKFSRSVSHVNDEFHTFRSYLRWMCVDQSNPFTAVVSWSVFLLLAVAVPAASHFLLACPSCDGRHSRPYNAVVQLSLTAVSTLSFLCLAAFVRQYGLRRFLFFDKLCDESETVRTNYMAHLNRSLKIISVFVGPCFVAEGAYKIWWYASGASQIPFLGNVYVSDSVACILELWSWLYRTTVIFIVCVLFRLICHLQILRLHDFARFFHVDSDVASVMSEHLRIRRHLRIISHRFRAFILLALLLVTGSQLACLLVTTKHPHDMNIYKTGELALCSVTLLSALCILLRSATKITHKAQAITGLAAKWHVCATLDSFDGVAMEGETPMAPQSSHETVFPNVGTDGESETDEAGDEEDEIDDTKFIPSYAYSTISYQKRQALVNYFENNRAGITVYGFMLDRSTLHTIFGIEMSLVLWLLGKTIGFS 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01130 439 MobiDBLite consensus disorder prediction 338 371 - -
Cca09g01130 439 PANTHER OS06G0635200 PROTEIN 13 439 - -
Cca09g01130 439 MobiDBLite consensus disorder prediction 342 356 - -
Cca09g01130 439 Pfam Protein of unknown function (DUF3537) 27 423 IPR021924 -
Cca09g01130 439 PANTHER RAS GUANINE NUCLEOTIDE EXCHANGE FACTOR K 13 439 IPR021924 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01130 Cca-Chr9 32450975 32455776 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01130 - - gmx:100806904 776.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01130 09 32450975 32455776 Cca09g01130 09 32450975 32455776 ECH