Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01079 ATGGAGAATTTTAGGTTTGGTGCTTTTTTGAGGAGTAAAAGGTTGGAGAGCTTCTCGAGCACAAACTCTGAGAAGAGGGTGGTAGAAACTCAAAAAGTTTCCGTAAAAGATGAATCTGAACAAAGGCATGTGATGGATGTTTTTGTGAATGATGATGATGGGTGGATTCCTGTGATCATATCTTGGATCAGAATTGTGATTTGTTTTGTTTCTATGATGGTCACAACGTTTATCTGGGCTTTGATCATGCTTGTGCTTATACCATGGCCTTGTGAGAGGATTAGGCAAGGAAACATTTATGGGCATGTGACTGGTAGAATGTTGATGTGGATTCTTGGGAATCCTATAAAAATTGAAGGTGCTGAGTACTCTAACAAGCGGGCCATTTACATCAGCAATCATGCATCTCCAATTGACATATTTTTGATAATGTGGTTGACTCCAACTGGTACCGTTGGAATTGCAAAGAAGGAGATAATATGGTATCCTCTATTTGGCCAACTTTATGTTTTGGCCAATCATCTTCGAATTGACCGGTCCAATTCAATTGCCGCTATTCAGTCCATGAAAGAGGCAGCTCGTGCAGTTGTGAAGAACAATCTGTCACTGATCATTTTTCCAGAGGGCACAAGGTCTAAAAGTGGAAGACTACTGCCTTTCAAAAAAGGTTTTGTTCATTTGGCACTGCAATCGCGTCTTCCCATAGTTCCAATGGTGCTAACAGGTACTCATCTGGCATGGAGAAAAGGAAGCTTACATGTTCGACCAGCACCACTTAGTGTCAAGTATCTTCCTCCTATAAGCACTGAAAATTGGACACTTAGAAACATTGATAACTATGTCAACATGCTACATAACTTGTATGCACAAAACCTTCCCAAGTCTCAGAGACCTTTGCTTTAA 903 0.4053 MENFRFGAFLRSKRLESFSSTNSEKRVVETQKVSVKDESEQRHVMDVFVNDDDGWIPVIISWIRIVICFVSMMVTTFIWALIMLVLIPWPCERIRQGNIYGHVTGRMLMWILGNPIKIEGAEYSNKRAIYISNHASPIDIFLIMWLTPTGTVGIAKKEIIWYPLFGQLYVLANHLRIDRSNSIAAIQSMKEAARAVVKNNLSLIIFPEGTRSKSGRLLPFKKGFVHLALQSRLPIVPMVLTGTHLAWRKGSLHVRPAPLSVKYLPPISTENWTLRNIDNYVNMLHNLYAQNLPKSQRPLL 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01079 300 CDD LPLAT_AGPAT-like 106 278 - -
Cca09g01079 300 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE ALPHA 55 296 - -
Cca09g01079 300 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 55 296 - -
Cca09g01079 300 SMART plsc_2 128 243 IPR002123 GO:0016746
Cca09g01079 300 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 65 290 - -
Cca09g01079 300 TIGRFAM AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 124 240 IPR004552 GO:0003841|GO:0008654|GO:0016020
Cca09g01079 300 Pfam Acyltransferase 116 240 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01079 Cca-Chr9 31741211 31745281 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01079 65 251 Acyl Lipid Metabolism Gene Families AT4G30580 30.457 5.73e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01079 K13509 - pvu:PHAVU_006G042300g 530.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01079 09 31741211 31745281 Cca09g01079 09 31741211 31745281 ECH