LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cca09g01077	ATGGACCAACATAACCAAAATAACACTCCAGATGGTTCAGGAGATGTGCCTTTGAAGCGCAAACGTGGTCGGCCACGGAAATATCCACGGCCAGATTCGGAGGAGGGTTCCTATATCCTAGCTAGTCAAAATAAAAGGCATACTCCTGTTCGTGCTGAACAAGCTCCAATACCTCCTGGATTTGAAGCGGTTAATGGAAATCAACTTCAAAGGGGTCAAGAGAATCATTCAAATAATGCCATGGTGGGCCAGCTAGTTTCTGGAGTAATTGAGGCTGTATTTGATGCTGGCTATTTGCTCAGTGTTAGGGTTGGTGATTCTGATACTACTTTGAGGGGGTTAGTCTTCAAGCCTGGACGATATGTTCCTATTTCACCTGAAAATGATGTTGCTCCAAGTGTTCCAATGATCCAAAGAAATGAAGTTTCCTTCCCTTCAAGATCTGCTCAGGTTCAAACTCCTCTCCCAAAGGAAAGGAATGAACAGGCTGTGAATGTTCATAGAGTTGAACCTCTTGCAATGAATGGCTCGCCATCTGCCCCTCAGCCTCAGGTACCTAGAGGAGCTGTTAGTTCTAGTAACTTCGTTGCCTCTTCTGGAAAGAATGTGCCTTCTGTGACAAGCCAGACCACTCATCAATTATCCAGAGCTAATATCGTGCCTGTATTGCTCCAACCTAATAATTTTTCAAATGGGGTACcagtttctaatcaaccatcacaagtcaagacccaagtttctctagggagtggagtgattgctgccaaagaaattcctgtagatggaaatcaAGCGCTTACCTCTCATACTCAAACTAGCCAGAATTTGTTGCCAAGTGGCGTGCAAAGTGAAGATGTTCCACATGTTCCACATAATCTATCTTCACCTAATGTGGTGACTGAAGATGAAGCCAAATCTATGAGAATGCCTAGCATGCCTTTTGAGCATCTGGTTACTGAAGTTGTCAAGAGGATCCAAGCTCCGTCAGATGCCATGGATACTGAGACTGACAACAGGAAGACAGGTGACAATATGGTAGTGAAGGATCCAAGCAGTAGGCAGGAAGACAAAGTTAATGACATGGATCAAGCTATCTTGATTAAGCCTCTGCAAGCTGTACAGTCTCATCCTCAGGAAAGCTTGGCATCGGCTCCCAAACCTTTGGACTATACTGAAACTAGCAGAGTGGCCGAGCTTTTGCAGGTTTTGCAGCATAACAAACCGGAGAACCAGGCATCGAAAGCAGCGGAGCTAGGATCTGGAAACAAATTGGATGATATAAGGAATTTAGGAACTGGACTTGAAGATGGTGGAACCGTTCAATCAACAAAGCCTTTCTGA	1341	0.4169	MDQHNQNNTPDGSGDVPLKRKRGRPRKYPRPDSEEGSYILASQNKRHTPVRAEQAPIPPGFEAVNGNQLQRGQENHSNNAMVGQLVSGVIEAVFDAGYLLSVRVGDSDTTLRGLVFKPGRYVPISPENDVAPSVPMIQRNEVSFPSRSAQVQTPLPKERNEQAVNVHRVEPLAMNGSPSAPQPQVPRGAVSSSNFVASSGKNVPSVTSQTTHQLSRANIVPVLLQPNNFSNGVPVSNQPSQVKTQVSLGSGVIAAKEIPVDGNQALTSHTQTSQNLLPSGVQSEDVPHVPHNLSSPNVVTEDEAKSMRMPSMPFEHLVTEVVKRIQAPSDAMDTETDNRKTGDNMVVKDPSSRQEDKVNDMDQAILIKPLQAVQSHPQESLASAPKPLDYTETSRVAELLQVLQHNKPENQASKAAELGSGNKLDDIRNLGTGLEDGGTVQSTKPF	446

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cca09g01077	446	MobiDBLite	consensus disorder prediction	329	357	-	-
	Cca09g01077	446	MobiDBLite	consensus disorder prediction	280	303	-	-
	Cca09g01077	446	MobiDBLite	consensus disorder prediction	1	58	-	-
	Cca09g01077	446	MobiDBLite	consensus disorder prediction	405	446	-	-
	Cca09g01077	446	PANTHER	AT HOOK MOTIF-CONTAINING PROTEIN	1	433	-	-
	Cca09g01077	446	MobiDBLite	consensus disorder prediction	333	357	-	-
	Cca09g01077	446	PANTHER	AT HOOK MOTIF-CONTAINING PROTEIN	1	433	IPR045881	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Cca09g01077	Cca-Chr9	31713856	31721792	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cca09g01077	-		-	gmx:100783413	706.827

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Cca09g01077	09	31713856	31721792	Cca09g01077	09	31713856	31721792	ECH