Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01075 ATGAAAGCAGTAGCGATTACACGTCAACTGAGTAACCTGATTTCCAACAAAAGCATTTTGGAGGATCTGAATAATGAACTAAAGAATCTGCTAGAACAAAAGCAAAGGGTGCAAGAAAATCTTACTTGGGAATCTGAAGAATTCGAGACTCAAATTAGCTGGTTAAAAAAAGTTGATGAGATTGATGAACAAGTGAGGGCATTCTTGTCCTACTTTGAAGGCAAAGGTACTTGCACAAATTTCATGTGGCGGTACAAGGTTGGTAAGAAATCAGCAAAGATGAGAAAAGATATCTCACAATTATATGAAGAAGGAAAATATTTTCTATCTATTAAACCAGCAAAAGACTATAAAGGCCCAAAATCAAGACCCGATACTATACATGATATCATGGAGGCCCTAAAGAACCCTGATCTTTTCCAAACAGTTGGAGTATGGGGGCTGGGTGGTGTAAGCACAACCTCAATAGCCAAACAAGTTGGGGAGCAAGCAAAAGAACAAAACTTGTTTGATTCAGTGGTTGTGATAAAAGTAACTGAGAAGCCAAAGGTGAAACAAGTTCAAGAAGATATTGCAACTGAATTGATTGTGCATTTCGATCAGGAAACACTTGTAAAAAGAAGAAACAAATTGCGCCAGAGAATGAAGAATGAGAAGATTCTTGTCATAGTTGATGACAAGTGGGGAGAGTTGAACCCTCAGGAATTTGACTTGGAGGAAATTGGAATTCCTTTGGGTGATGAACATAAAGGGTGCAAATTATTATTGGCATCAGGAAATTTGAATTTCATACAAAATGTGAAGGGTGGCACTAAGGTTAAGGTGTTTCAGTTAGAAGTATTACTAGAAGATGAGGCTCTGAGCTTGTTTGAGAAGATGGTTGGAGGTGTTGCTCAAGATTCTGATGCAAGTTCCATTGTAACCGATATAGTTAAAAGTTGTGAAGGTTCAACATCATTAATTTTTTCCATTGCTAAAGCATTGAAAAAGAAGGGCTTAGAAGACTTGATGAAGTTAAAGGAAAATGTTTCACCAACAAAACTATTGTCCTATAGTTTAGAAAATGATCAGGAACTCAAATCATTATTGTTGCTTCTGACTATTCGGGGAAGAAGGGCTATTAACAGGTATAGCATATTTATAGACATGTGGATTGGTTTAATAAAAAATATTGAAACATTAGATTCTGCAAGAAAGAAGCTTGATTCACTAATTAGTGATTTAAAGGCCTATGGTCTTCTTGTTGAAGATGGAAAGGAAAATGTTAAGATAGATGACTTCATATGGAAAACTGCTTACTCAATAGCTCAAAATGATGAACAAGGTTCAATAATTTCAAGAGAATGGCCACATGATGAAGAACTGCCAAAAGGTTTAGCCTTCTGCAACATAAATATTGTGAGTGGTTTGGCGATTCCTGGAAGGTTGCAATGTCCAAACTTGCAACAGCTTGTGATAAGTACCGACACTCCCTCAATGCAAGTTCCAGATTCCTTTTTTGAAGAGACTAAACTTCTAAAGGTCCTAAATTTTGTTGGCTTTGATTGTTCAAAGCTTCCAAATAGTTTGGCCTCGTTAGAGAAGCTTGAAGCATTATCCATGAATAATTGCAAATTGGGAGATATTACTAACGTTGGTGAGCTCACAAACTTAAAAGTGCTTAGCCTTCTTGGAAGTAGTATCGAACAGTTGCCACGACAAATTGGACAACTTGAGAAGTTGCTATTCTTGGATTTAAGAGATACATCTCTCCAAGTGATTCCATACAATGTTTTGTCCAAATTGGAAAGGTTAGAAGAAATATATTTGAGAAAGTCATTTTCTAAGTGGGAAACTGATCAATCTACCAATGCAAGCTTGAAAGAGCTTGAAAAATTGTATCACTTGGCATATATAGAAGACTTGAATGTTCCTGATCCTCAGGCATGGCCAGTTGATTTGTTCTTTGGAATGCTAAAATCATATACAATTTTTATTGGGGATAAGTGGGTTCAAACGCATGATGGTGATCATCGATTAAAGACATTGAAACTGAAGCTCAACAGAGAGTTTCAGTCAGAATATGGAATCAAAAGAATGCTGAAAAGTGTTGATGTTTTGTACCTTGATGAACTAAATGGTGTCCAGAATATTGTTAGTGATTTGGACAGTGAGGGATTTCCCCATTTGCAGTCTCTCCTTATACAAAATAATGCTGAAATCAAATGCATAGTGGGGCAAAGTCATGATGATCTTGATGCTTTCACCAACTTGGAGTCTTTGACTCTCAACAATCTAAACAATTTGGAGCACATATGCCATTGTAATCATTTAACTCAGAGGTCTTTCTTCAAACTAAGAGTTCTCAAAGTACATAGCTGTGATGCAAAGGGATGTCTCTTCTCAAGTTCAATGATCAAAGGCCTTCCTCATCTGGCTAATGTGGAAGTTTCAGAGTGCAAATCCATAAATGCAATTGTTCTTATAGAAGGTGCAGAGAATTCTCCCATAGAATTTCTTGAGTTGTGTTCTCTAACATTGAAAGGACTCCCAACATTAGTCAGTTTCTGCTTATCAAGTCAAGAATCGTCTTCTTCCACTCATACACCCACACTTTTTTATGACCAGGTGTGTTGTCCTAATTTGGAGACAATGGTGATTTCCAAGGTTAGTGAATTGACAGCAATATGGAATGAAGGGTATGGTATTTCAAATTCGTTTTGCAAACTAAAAATTGTAGAGATCACAGATTGTGAGAAATTGAAGACTGTTTTTCCAGTTAATATTTCTAATATTCTTGATAATTTAAAGATATTAGAGAATTTGAATTACTCAAGAAAAAATTTGAGGAAGAATGGCAAGATGGAGTTTCCACTTTACCAGCTCACCGACGGCCTGAAGCTCAAAAAATGA 2892 0.3645 MKAVAITRQLSNLISNKSILEDLNNELKNLLEQKQRVQENLTWESEEFETQISWLKKVDEIDEQVRAFLSYFEGKGTCTNFMWRYKVGKKSAKMRKDISQLYEEGKYFLSIKPAKDYKGPKSRPDTIHDIMEALKNPDLFQTVGVWGLGGVSTTSIAKQVGEQAKEQNLFDSVVVIKVTEKPKVKQVQEDIATELIVHFDQETLVKRRNKLRQRMKNEKILVIVDDKWGELNPQEFDLEEIGIPLGDEHKGCKLLLASGNLNFIQNVKGGTKVKVFQLEVLLEDEALSLFEKMVGGVAQDSDASSIVTDIVKSCEGSTSLIFSIAKALKKKGLEDLMKLKENVSPTKLLSYSLENDQELKSLLLLLTIRGRRAINRYSIFIDMWIGLIKNIETLDSARKKLDSLISDLKAYGLLVEDGKENVKIDDFIWKTAYSIAQNDEQGSIISREWPHDEELPKGLAFCNINIVSGLAIPGRLQCPNLQQLVISTDTPSMQVPDSFFEETKLLKVLNFVGFDCSKLPNSLASLEKLEALSMNNCKLGDITNVGELTNLKVLSLLGSSIEQLPRQIGQLEKLLFLDLRDTSLQVIPYNVLSKLERLEEIYLRKSFSKWETDQSTNASLKELEKLYHLAYIEDLNVPDPQAWPVDLFFGMLKSYTIFIGDKWVQTHDGDHRLKTLKLKLNREFQSEYGIKRMLKSVDVLYLDELNGVQNIVSDLDSEGFPHLQSLLIQNNAEIKCIVGQSHDDLDAFTNLESLTLNNLNNLEHICHCNHLTQRSFFKLRVLKVHSCDAKGCLFSSSMIKGLPHLANVEVSECKSINAIVLIEGAENSPIEFLELCSLTLKGLPTLVSFCLSSQESSSSTHTPTLFYDQVCCPNLETMVISKVSELTAIWNEGYGISNSFCKLKIVEITDCEKLKTVFPVNISNILDNLKILENLNYSRKNLRKNGKMEFPLYQLTDGLKLKK 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01075 963 PRINTS Disease resistance protein signature 142 157 - -
Cca09g01075 963 PRINTS Disease resistance protein signature 214 228 - -
Cca09g01075 963 PRINTS Disease resistance protein signature 569 585 - -
Cca09g01075 963 Coils Coil 10 47 - -
Cca09g01075 963 Gene3D Ribonuclease Inhibitor 664 956 IPR032675 -
Cca09g01075 963 Pfam NB-ARC domain 126 366 IPR002182 GO:0043531
Cca09g01075 963 Gene3D - 113 275 IPR027417 -
Cca09g01075 963 PANTHER PHOSPHATASE, PUTATIVE-RELATED 6 941 - -
Cca09g01075 963 PANTHER - 6 941 - -
Cca09g01075 963 Gene3D Ribonuclease Inhibitor 449 628 IPR032675 -
Cca09g01075 963 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 112 343 IPR027417 -
Cca09g01075 963 SUPERFAMILY L domain-like 471 890 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01075 Cca-Chr9 31644514 31648599 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01075 - - aprc:113854183 1082.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01075 09 31644514 31648599 Cca09g01075 09 31644514 31648599 ECH