Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01068 ATGGAACCGAAACTACTTCTAACGGTTTTATTGATAGTGTCTGCAACTGCTGCATCTGATTACATTCGACCTCTGCCTCGAAAAGCCTTACATCTTCCATGGGATTCTAAACCCTCCTCTTTCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTCCCTCAGCAGGTACGCATTTCTTTAGCAGGAGACCAGCACATGAGAGTTACCTGGATCACTGATGATAAATCTGCACCTTCAATTGTAGAATATGGAACACTTCCAGGGCAATATCATTCTGTAGCTGAAGGAGAAACCAAATCTTACAGTTATCTGTTCTATAGCTCAGGAATGATACACCACACAGTGATTGGGCCTTTAGAGCATAATTCTGTGTACTATTACCGATGTGGTGGACAAGGTCCTGAGTTCCAACTCAAAACTCCTCCAGCACAATTTCCAATCACTTTTGCTGTGGCTGGGGATTTGGGTCAAACTGGGTGGACTAAATCAACATTGGATCACATTGACCAATGTAAGTACAATGTTCACCTGCTTCCAGGAGACCTTTCATATGCTGATTATATCCAGCATCGTTGGGACTCATTTGGAAGACTAGTGCAGCCACTTGCAAGTGCAAGGCCATGGATGGTAACACAAGGGAACCATGAAGTTGAGAGCATTCCTTTGTTAAAGGATGGGTTTGTGTCCTACAATTCCAGGTGGAAAATGCCATTTGAGGAAAGTGGATCAAGTTCAAATCTCTATTATTCATTTGAAGTTGCTGGTGTTCACATTATCATGCTCGGGTCCTATGCAGATTATGATGAGTACTCTGAACAATATAGATGGCTAAAGGCAGATTTGTCAAAGGTGGATAGGAAAAGGACACCTTGGTTGCTCGTGTTATTTCATGTTCCATGGTATAATAGTAACACAGCTCATCAAGGTGAAGGGGCTGATATGATGACAGCTATGGAGCCATTGCTTTATGCAGCTAGTGTTGATTTAGTTCTTGCTGGTCATGTGCATGCTTATGAACGCTCGAAACGTGTATACAATGGAAGACTTGATCCTTGTGGTTCAGTCCATATAACCATTGGTGATGGAGGAAACAAAGAAGGCTTAGCTGCTAGGTATATAAATCCACAGCCAATATGGTCAGAATTCCGCGAAGCCAGTTTTGGTCATGCACAGGATGTGTTGATCAGAAGAGAAATGAACTCAGGAATAAACTTATGA 1299 0.3895 MEPKLLLTVLLIVSATAASDYIRPLPRKALHLPWDSKPSSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPQQVRISLAGDQHMRVTWITDDKSAPSIVEYGTLPGQYHSVAEGETKSYSYLFYSSGMIHHTVIGPLEHNSVYYYRCGGQGPEFQLKTPPAQFPITFAVAGDLGQTGWTKSTLDHIDQCKYNVHLLPGDLSYADYIQHRWDSFGRLVQPLASARPWMVTQGNHEVESIPLLKDGFVSYNSRWKMPFEESGSSSNLYYSFEVAGVHIIMLGSYADYDEYSEQYRWLKADLSKVDRKRTPWLLVLFHVPWYNSNTAHQGEGADMMTAMEPLLYAASVDLVLAGHVHAYERSKRVYNGRLDPCGSVHITIGDGGNKEGLAARYINPQPIWSEFREASFGHAQDVLIRREMNSGINL 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01068 432 Gene3D - 79 170 - -
Cca09g01068 432 SUPERFAMILY Metallo-dependent phosphatases 173 415 IPR029052 -
Cca09g01068 432 Pfam Purple acid Phosphatase, N-terminal domain 80 160 IPR015914 GO:0003993|GO:0046872
Cca09g01068 432 Pfam Iron/zinc purple acid phosphatase-like protein C 382 417 IPR025733 -
Cca09g01068 432 PANTHER PURPLE ACID PHOSPHATASE 18 5 419 - -
Cca09g01068 432 PANTHER ACID PHOSPHATASE RELATED 5 419 IPR039331 GO:0003993
Cca09g01068 432 SUPERFAMILY Purple acid phosphatase, N-terminal domain 76 169 IPR008963 GO:0003993|GO:0046872
Cca09g01068 432 Pfam Calcineurin-like phosphoesterase 175 365 IPR004843 GO:0016787
Cca09g01068 432 Gene3D - 171 427 IPR029052 -
Cca09g01068 432 CDD MPP_PAPs 171 416 IPR041792 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01068 Cca-Chr9 31423595 31428250 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01068 136 426 Miscellaneous Gene Families AT1G13900 27.350 1.37e-24 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01068 K22390 - gmx:100782338 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01068 09 31423595 31428250 Cca09g01068 09 31423595 31428250 ECH