Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01065 ATGATCGCATGGACGAAGCAGTTGAATGCTGCATTTGGGACTTCGTTTCTTTGGCTGATTTGCTTGATCTACTTCACCCAGGGTTTTAGGTCTTTTGTATGGACAGCGATTTCTTATCAGCTTAAAGATAATCTTAAGTTATCACCATCAGCTTCCCAATTTGTGTTTTCGGTAGCATTTTTCCCATGGAGCATTAAACCGTTATATGGAATACTTTCTGATTGCATTCCAATTAAAGGAAGAAAGCGGATTCCCTACTTAGTGATTGCCACTGTGCTCTCCCTAGTGCCATGGTTTATTTTAGGATTAGTTTCAACTTTGAGGGATTCAACATGGCATCTTATGGTATTGTTGACTGCACAAAACTTGGGCTCAGCAATGGCAGATGTTGTTGTTGATGCAATGATAGCTGAGGCAGTAAGATATGACCGGGCCTCATTTGCAGGAGATCTCCAGTCAATATCCTGGTCTTCTATGGCTTTGGGAGGAATATGTGGGAGTTTGTTAGGAGGATATGCACTATCCAATTTACAGATAGATGCTATTTTTCTTCTATTTTCTGTATTACCATGCATACAGTTAGTATCATGCTGTTTTGTGGAGGAGAACTCCGTAAATAGCAAGGTTACACCAGAGGATTCAATTGTAAAGGATTCTCATATGAATGCTAGTACTCTAGATGAAGATAGTCCTTTAACCAAAAAGTCCCACAGCAGCACAAGAAGAAGAAAGAAGGGAAAAAAGAATGCAAAAGGTAGAGCAGTAAATAGCAGCAAACCAAAGATTTCTAAGAAAGGAGACTCCCTTGTACTTAAGTGGTTCCGTTCTTTGAAAGAAGCAATTTATGATTTGTGTCGAGCATTTAGACAGCCAATGATTTGGAGACCTATGTCTTGGTTTTTCATTGCCCACGTTACCATTCCGAATCTTTCAACCGTCATATTCTACTACGAAACTGAGGTTTTAAAGCTAGAAGCATCTTTCCTTGGGACTGCACGGGTTGTTGGTTGGTTGGGACTTATGCTGGGAACCTTCATTTATAATCGTCACCTAAAGTATATGACCCTACGAAGAATCCTCATGTGTGCCCATATTGGGTTGGCCTTCTTGAATCTTCTGCAGATTGTGGTAGTGTCTAGGAAAAACATTGCGTTTGGTGTCTCAGACAAGATTATGGTGCTTTTTAGCTCGGCTCTTGTTGATGGAATCAATCAATTCAAGTTTATGCCTTTCCTGATCTTATCTGGACAGCTATGCCCCCCAGGAATTGAAGGGACTTTATTTGCCCTTTTCATGTCAATAAACAATCTGGGAACCACACTAGGCTCTTTTGTGGGTGCTGGCTTGGCTTCTGTATTGAACATTGATTCAGGATCATTTGACAATCTTCTCTTGGGTATCATAGTTCATGCCTTGTGCAACTTCATCCCAATTGCTTTTCTGTTTCTGATACCAAAGGAAGCTACAGGTTCATCAACATAG 1482 0.4055 MIAWTKQLNAAFGTSFLWLICLIYFTQGFRSFVWTAISYQLKDNLKLSPSASQFVFSVAFFPWSIKPLYGILSDCIPIKGRKRIPYLVIATVLSLVPWFILGLVSTLRDSTWHLMVLLTAQNLGSAMADVVVDAMIAEAVRYDRASFAGDLQSISWSSMALGGICGSLLGGYALSNLQIDAIFLLFSVLPCIQLVSCCFVEENSVNSKVTPEDSIVKDSHMNASTLDEDSPLTKKSHSSTRRRKKGKKNAKGRAVNSSKPKISKKGDSLVLKWFRSLKEAIYDLCRAFRQPMIWRPMSWFFIAHVTIPNLSTVIFYYETEVLKLEASFLGTARVVGWLGLMLGTFIYNRHLKYMTLRRILMCAHIGLAFLNLLQIVVVSRKNIAFGVSDKIMVLFSSALVDGINQFKFMPFLILSGQLCPPGIEGTLFALFMSINNLGTTLGSFVGAGLASVLNIDSGSFDNLLLGIIVHALCNFIPIAFLFLIPKEATGSST 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01065 493 SUPERFAMILY MFS general substrate transporter 17 487 IPR036259 -
Cca09g01065 493 MobiDBLite consensus disorder prediction 237 254 - -
Cca09g01065 493 PANTHER FOLATE-BIOPTERIN TRANSPORTER 4-RELATED 1 493 - -
Cca09g01065 493 Gene3D MFS general substrate transporter like domains 14 483 IPR036259 -
Cca09g01065 493 Pfam BT1 family 27 487 IPR039309 -
Cca09g01065 493 TIGRFAM fbt: folate/biopterin transporter 18 486 IPR004324 GO:0016021
Cca09g01065 493 MobiDBLite consensus disorder prediction 224 262 - -
Cca09g01065 493 CDD MFS_FBT 18 482 - -
Cca09g01065 493 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 1 493 IPR039309 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01065 Cca-Chr9 31388289 31393103 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01065 - - gmx:100781251 899.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01065 09 31388289 31393103 Cca09g01065 09 31388289 31393103 ECH