Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01057 ATGGATGAGTCAATGACGAACATCATGGAGGTGAGGGAAGATTTCATGGTTTCACCTATTGGTGACAGTAAACCATATTTGAGAACTGCTTATTTTCTCAAACCCCTAGCAAAGTCCCTTGATGGAGCAGTTTCTGGGGTCCTTTCATCTTCTGTGTCCATGCCACTGCCATCAGTGTTTGAACCAAAGGTGTGGCCTTTGGTGATCCACTCCATCGGTTGGCGCTGCCCAATGAAGAAGTGGGTTGAATGGGTGGATGCCCTTCAAGTCAAGTATGAGTCATTGTGGAAGAAAGTTGGCATCTTTGAAGCCATCAAGAGCACCAAGTGTTCCATAGTGAACCATCAAAACTTGTGTTATGGGGTTGCTGAGAAGTGGTGTCCTGAGACAAACACCTTTTTGTTTCCATGGGGTGAGGCAACAATCACATTGGAGGATGTGATGGTCTTGGGAGGTTACCCTATTGTTGGTGATCCTATCTTCACCCCACTTCAAAGCCAGGAAATGAGAGAGGTGGAGAAGAAGCTGATTCATGCAAGACAAGAGCCTTGGAGGAGGAAAAAAGGTAAGGCTTCTTTATCTGCATGGATTGATCTTTTTGTCAATAGTGGTAGTGAAATTGAGCATGAAGCATTTCTTGCAACTTGGTTGACAATGGTTGGTTTTTCCACCAATGGTTTGGTGAGTAGGTTTGTTTTCCCTATTGCTATTCATCTTGCTAGAGGGAATCCTGTTGCTTTGGGACCAGCAGTTTTGGCTAGCATATATACGGATTTGAGTTTGCTTAAGAAAGCAATAGTTGGTGTGACTGGTGATAACTTGGAATCTGAGCCCAGGTTGGTTGGTTTCAAAGACCCTGTGCTGTTTAGGTGGCACAAGGTTAGGCCCTTGAAAATTTACGATGTGAGATTGGCGCTGGACTCGGCTACAGAGCATTTTCGATGGCGCCCTTACGTTCAATATGCTGGTAAGTTCAAGTTGTTTTATCCTGAAAATGAAACTTTGGTACCATTTGAGACGGATTTGGATACCGAACAAATCTCTTTTGTTACATGCATGAGAGTTTCTGCGCTTGTTGGAATTGAGTCTACTATAAAGCAGTACCTGCCACATAGAGTTGCTATGCAATTTGGAATGGATCAAGATGTTCCTGATTGTGTTCCTGGATTCTATGGAACTGAAGCCATTACTTGGAAAAATTACTGCAGGCCCATATCTTGTAGGAGTTTGTATTTTCCTGCTAGGCTTTTTGAAGGAGATGTTACCACACGGTATGCAAAGTGGTGGAAGCAATCAGTACTGAGTTATCAGGATTTTGCAAAGAATATTGTGCACCAAGAGAGAAATCCAAGGCCTCATTTACCAAAAGCAAATACAAATGGTAATGATGCTGATGTTCCTCCTGGTTTTCCTCCCAAACTTGTTAGAACTGTATATTTTGGAAAATCTGGTGGTGATGATTCAAATGCTAGGAAAGGTAATATTGATGATGATGTTCCAACAAAAATTCTTTCAAAACAATGCACTCCGACTCCTTGCATTTCTGACGAGAAATTTAAGCATGTCTTGGAAGAGAATAAGTGTGGTGACATGGCTCAGAGTTCAGTTAAAGGAAAAACATATCAATGTAGGAGTTTGTCCAACGCAAGTTCTTCATCCGCTACTGCATATTATGAAAATGTTAAAAGGATATCACCACTCACAAAATTGGTTGTGAATGATGTCATTGAACCATTGATGGGGGGTATGGAGGAAGATTTTGAAGATGCAAATGGGAGCAATGAATCATGGATGTCAAGTGAGGGAGTAAGCCTATCTGGTCCCCAAGGTGAAAGCTATAGCTGTGCATCTGGAACAAAAGTAATGGATCTTGAACAGAGAATCAACAGACTGGAGACAGTGATTAAAAAATTGAAGATAGCAAAATTTGGTCACTGTTGA 1941 0.4178 MDESMTNIMEVREDFMVSPIGDSKPYLRTAYFLKPLAKSLDGAVSGVLSSSVSMPLPSVFEPKVWPLVIHSIGWRCPMKKWVEWVDALQVKYESLWKKVGIFEAIKSTKCSIVNHQNLCYGVAEKWCPETNTFLFPWGEATITLEDVMVLGGYPIVGDPIFTPLQSQEMREVEKKLIHARQEPWRRKKGKASLSAWIDLFVNSGSEIEHEAFLATWLTMVGFSTNGLVSRFVFPIAIHLARGNPVALGPAVLASIYTDLSLLKKAIVGVTGDNLESEPRLVGFKDPVLFRWHKVRPLKIYDVRLALDSATEHFRWRPYVQYAGKFKLFYPENETLVPFETDLDTEQISFVTCMRVSALVGIESTIKQYLPHRVAMQFGMDQDVPDCVPGFYGTEAITWKNYCRPISCRSLYFPARLFEGDVTTRYAKWWKQSVLSYQDFAKNIVHQERNPRPHLPKANTNGNDADVPPGFPPKLVRTVYFGKSGGDDSNARKGNIDDDVPTKILSKQCTPTPCISDEKFKHVLEENKCGDMAQSSVKGKTYQCRSLSNASSSSATAYYENVKRISPLTKLVVNDVIEPLMGGMEEDFEDANGSNESWMSSEGVSLSGPQGESYSCASGTKVMDLEQRINRLETVIKKLKIAKFGHC 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01057 646 Coils Coil 621 641 - -
Cca09g01057 646 PANTHER PROTEIN MAIN-LIKE 2 3 273 IPR044824 GO:0010073|GO:0048507
Cca09g01057 646 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 7 LONG FORM HOMOLOG 285 452 - -
Cca09g01057 646 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 7 LONG FORM HOMOLOG 3 273 - -
Cca09g01057 646 PANTHER PROTEIN MAIN-LIKE 2 285 452 IPR044824 GO:0010073|GO:0048507
Cca09g01057 646 MobiDBLite consensus disorder prediction 448 467 - -
Cca09g01057 646 Pfam Plant mobile domain 100 265 IPR019557 -
Cca09g01057 646 Pfam Plant mobile domain 282 430 IPR019557 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01057 Cca-Chr9 31180284 31182549 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01057 - - gmx:102666527 832.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01057 09 31180284 31182549 Cca09g01057 09 31180284 31182549 ECH