Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01049 ATGGCTTCCATCCCATGCATCACCCATAGTCCCATCACTTCTATACCCAATGTCTCTCCTTCACTGCGTGTTTCCGCCTCACAGTTTGTGGGCTTCAGAAAGAGACTTGGGTGGGTCAGCCTCACCTCCGGAATTGGGCCCTCCAACGGCTCCCGAGCCACGTGCTGGTTCAGGTTCGGCAAGAACGGCGTTGATGCCGAGGGTGCTGGTATTTATGGCAGCCAGCGCCGTGATGACTTTGACAGAGACGATGTGGAACAGTACTTCAACTATATGGGGATGCTGGCCGTAGAAGGATCATATGACAAAATGGAGGCTCTTCTAAGCCAAAACATCCACCCTGTGGACATCCTTCTCCTGTTAGCTGCCTCAGAAGGTGACAAGCCAAAAATTGAAGAACTCTTGAGAGCTGGAGCAACATATGATGTTAAAGATGCAGATGGACGGACAGCGCTCGATAGGGCTAACGACGAAATTAAAGATTTCATTCTTAATTTTTCAGTGCAGAGGGCATGA 516 0.5 MASIPCITHSPITSIPNVSPSLRVSASQFVGFRKRLGWVSLTSGIGPSNGSRATCWFRFGKNGVDAEGAGIYGSQRRDDFDRDDVEQYFNYMGMLAVEGSYDKMEALLSQNIHPVDILLLLAASEGDKPKIEELLRAGATYDVKDADGRTALDRANDEIKDFILNFSVQRA 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01049 171 Gene3D - 75 168 IPR036770 -
Cca09g01049 171 SUPERFAMILY Ankyrin repeat 94 163 IPR036770 -
Cca09g01049 171 PANTHER PROTEIN LHCP TRANSLOCATION DEFECT 1 171 IPR044242 GO:0006886|GO:0009570|GO:0090391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01049 - - gmx:100500557 279.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01049 09 31070723 31074593 Cca09g01049 09 31070723 31074593 ECH