Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00484 ATGGTTGTTGAGCTTTGCTCAGAAAATTGTGGGGTATCAATATCATCCATGAGTCCAAGGATTTCATTCTCACATGACTTCTCCCAATCAGATGTCATTCCAGTTGAGAAGCACCCTTTGAGATCAAACTCATCTGGCTTGAATCCAAGCATTGATTTTGACTTCTGTGTTCATGAAAGCTTAGAGCTTGAGTCCTCTTCAGCAGATGAACTTTTCTCAGATGGGGTTATCCTCCCCATTCAAATCAAGAAGAAGAACATCAACAATGCTCTTTTGAAGCAAAAGAGTCAAAAACAAGCACCACCACCTAAACCTCAATCACCACCCTCACACACTGTTTGTGAAAATGCCTCTTCCACCAGCAAAGGCTCCAAGAAAGAGGGTCCCAAACATGGCAAGGACTTGAATGAAGAAGTGGATGAGAAGCAAAGTTCCAAGTCATTTTGGAGATTCAAGAGAAGTAGCAGTTGTGGAAGTGGATATGGAAGGAGCTTGTGCCCTTTGCCACTTTTGTCTAGAAGCAATTCAACTGGATCTTCACCAAGTGTTAAGAGGATACCACTGTCAAAGGAGGGTCATCATCATGTTAAGCAAAATTCCCAGAAACGTTCTTCCATCACAAGGTCTTCCAACTCCGTGGCTTCACACAATCATCAAAAGCCTCCATTGAAGAGGAGTCATGGGTCTTATCATGCTAATGGTGTTAGAGTTAGTCCTGTTCTCAATGTTCCTTCTGCAAACCTTTTTGGTTTTGGCTCAATCTTCTCCAACAATAGAGATAAGAGCAAGAAGAAATAG 798 0.4211 MVVELCSENCGVSISSMSPRISFSHDFSQSDVIPVEKHPLRSNSSGLNPSIDFDFCVHESLELESSSADELFSDGVILPIQIKKKNINNALLKQKSQKQAPPPKPQSPPSHTVCENASSTSKGSKKEGPKHGKDLNEEVDEKQSSKSFWRFKRSSSCGSGYGRSLCPLPLLSRSNSTGSSPSVKRIPLSKEGHHHVKQNSQKRSSITRSSNSVASHNHQKPPLKRSHGSYHANGVRVSPVLNVPSANLFGFGSIFSNNRDKSKKK 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00484 265 MobiDBLite consensus disorder prediction 171 231 - -
Cca09g00484 265 MobiDBLite consensus disorder prediction 94 145 - -
Cca09g00484 265 PANTHER F1O19.11 PROTEIN 1 260 - -
Cca09g00484 265 PANTHER OS06G0675200 PROTEIN 1 260 - -
Cca09g00484 265 MobiDBLite consensus disorder prediction 202 219 - -
Cca09g00484 265 MobiDBLite consensus disorder prediction 124 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00484 Cca-Chr9 11986873 11988162 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00484 - - gmx:100810949 366.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g00484 09 11986873 11988162 Cca08g00240 08 3343251 3344757 ECH
Cca09g00484 09 11986873 11988162 Cca09g02712 09 52794686 52795402 ECH
Cca09g00484 09 11986873 11988162 Cca09g00484 09 11986873 11988162 ECH
Cca07g02498 07 53785075 53785886 Cca09g00484 09 11986873 11988162 ECH
Cca02g02648 02 47697916 47701947 Cca09g00484 09 11986873 11988162 ECH