Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01791 ATGGCTCGGAAGGGTAATCAGCAAAAGAATGGAGTGGACCGGTTGAATCATAAGAAAGGGGTTTCTAGTGGTGTACTTCCGGGGATGAAGGACCATGTTAAAGGAGGGCCGGTGAAGGTTTTCCCGAGAGAGGAACTCGCCGACGGGGATAGGCCTGGCGGAGTTTCGCAGGCTTCATGTGATGCTAGTTCTTCGGGTGATGACTATGTCAATGATCAGAGGTCGGAAAAGGCTTATAGGAAAGAGAAGCAGGGGATGGCTGCAAAGCATAACCAGGAGGAGTCCTTGCCCTTTGAGGCGAATTCAGGGGATGGCAGTGTGAATTCTGAAGCTTCTGTACAAGAAGAGAATGGGACTCTACCTAGAAGTAATCGAGGTCAACAGAGTATAAGGAGTAGATTGAGCTGTATACTGGATAGTGTGCATGTGAGAAGTGTGGTGGAAAAAGTAGAGCTTGCTGATAATGTGATAATTAGGAGATTAAGGTTGTCAATGTTTTCCATCTTTACAGCAGTTACAGAGTGGCTAACCAGGCAGACTCCGTTGCTTGTATCTCTTAGAACCAGCATGTTTAAAGCGTGTCATAATGTCAGAACTAAAGTTGTGCAGGCGTATCCGGTTGTTCTGAAGTGGCTCATGCATTTTGCAAACATAATGCTTCTGTTGTCAGTGTTTTGGTTGGACTGTGCTCTTCGGGGTATTGATTCATTTGTTCGTATGGGTACAACGTCCTTCTTCTCTGTTATATGGTGTACCGTATTCTCGGTGATTAGTATGATAGGGATGTTCAAGTTTCTTGCTGTCCTGGGCCTGGCTGCCTTTATTGGATTTTTTCTTGGGCTCATGCTTGCAATTTTGGTACTTGCAATCATTGGAGTTGTTACCTTGTGGTTTTATGGTAGCTTTTGGACTACGGCACTGTTCATTATCCTTGGAGGATTGGCATTTATGTCAAGTCATGAACGGGTAGCGCTACTTATCACCACAGTGTATTCTGTCTATTGTGCATGGCAGTATGTTGGGTGGCTTGGTTTGCTATTGGCTTTTAATTTAGCTTTTATCTCTAGTGATGTTCTGATATACTTCCTCAAGAAAAACATAGATCAACAGAGTAGATCCAATCCTTTTGAGCAAAGAGCTGGAATGCATGGTCAACCAGGATTTAGTGATGAACCGACACATGCTTCTTCCTCTGAAAATGGACCGGGACCATCTGCAGATCGCAGTGCTGGCATCCCTTCAACTAGTGGGGTTGATTCTGATGTAACTTCTGAAGATGAAGTTGTCCGTTTGTTGAACTGCTCTGATCACTATTCTGCACTGGGCTTGACGCGGTATCAAAATATAGATGTTTCAATATTAAAGCGGGAATATAGAAAGAAGGCAATGTTGGTACATCCGGATAAAAATATGGGTAATGAAAAAGCTGTAGAAGCCTTTAAGAAACTTCAAAATGCGTATGAGATTCTAATGGATTCCTTGAAGCGAAAAGCTTATGATGACGAGTTAAGGAGAGAAGAGATTTTGAGTGTATTTCGTAGATTTCATGATTCTTCTCGTAAGAATGGTAAGCATGGGTTCTTTCCTTCGGGATTTGCACGGTCAGATGCAGATGGTGAGGACCCATTTGGTGATTCTAGGCGAATAGCCTGCAAAAGGTGTGGTGGCTTTCATGTTTGGATACACACCAAGAAACAAAAGTCTCGGGCAAGATGGTGCCAGGATTGCCAAGATTATCATCAAGCTAAGGATGGTGATGGATGGGTTGAACAATCTTCCCAACCATTTCTTTTTGGCTTATTGCAGAAGGTGGATGCTCCTTCGGCATATGTGTGTGCTGGTAGCAGGATATATGATGCCACTGAATGGTACATCTGTCAGGGCATGAGATGTCCAGCGAATACTCATAAGCCAAGTTTTCACGTCAACACCAGTTTAATGTCCAAGCATAATTCTGGCAAAGGAACCACCAGTTCAGGTCAAAGAGGTGGACGGATGCCGACACCTAATATTGAAGAAACCATGACCGAGGAAGAGTTCTTTGAGTGGTTACAGAATGCAGTACAAGCAGGTGTGTTTGACAATTTTAATGGCACTGCAGCAGAGAGCCCATCTCCCAAATCTGGAAATGGGATGAAAAATCCTGGtagtggtaataatagtggtggcagtagcagtggtactagcagtagcagcaagagAAAGAAAAAGGGAAAAAAACAGTGGTGA 2229 0.4262 MARKGNQQKNGVDRLNHKKGVSSGVLPGMKDHVKGGPVKVFPREELADGDRPGGVSQASCDASSSGDDYVNDQRSEKAYRKEKQGMAAKHNQEESLPFEANSGDGSVNSEASVQEENGTLPRSNRGQQSIRSRLSCILDSVHVRSVVEKVELADNVIIRRLRLSMFSIFTAVTEWLTRQTPLLVSLRTSMFKACHNVRTKVVQAYPVVLKWLMHFANIMLLLSVFWLDCALRGIDSFVRMGTTSFFSVIWCTVFSVISMIGMFKFLAVLGLAAFIGFFLGLMLAILVLAIIGVVTLWFYGSFWTTALFIILGGLAFMSSHERVALLITTVYSVYCAWQYVGWLGLLLAFNLAFISSDVLIYFLKKNIDQQSRSNPFEQRAGMHGQPGFSDEPTHASSSENGPGPSADRSAGIPSTSGVDSDVTSEDEVVRLLNCSDHYSALGLTRYQNIDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEILMDSLKRKAYDDELRREEILSVFRRFHDSSRKNGKHGFFPSGFARSDADGEDPFGDSRRIACKRCGGFHVWIHTKKQKSRARWCQDCQDYHQAKDGDGWVEQSSQPFLFGLLQKVDAPSAYVCAGSRIYDATEWYICQGMRCPANTHKPSFHVNTSLMSKHNSGKGTTSSGQRGGRMPTPNIEETMTEEEFFEWLQNAVQAGVFDNFNGTAAESPSPKSGNGMKNPGSGNNSGGSSSGTSSSSKRKKKGKKQW 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01791 742 MobiDBLite consensus disorder prediction 1 126 - -
Cca08g01791 742 PANTHER OS03G0832900 PROTEIN 1 742 - -
Cca08g01791 742 MobiDBLite consensus disorder prediction 696 742 - -
Cca08g01791 742 ProSitePatterns Nt-dnaJ domain signature. 480 499 IPR018253 -
Cca08g01791 742 MobiDBLite consensus disorder prediction 375 422 - -
Cca08g01791 742 SUPERFAMILY Chaperone J-domain 431 520 IPR036869 -
Cca08g01791 742 MobiDBLite consensus disorder prediction 36 50 - -
Cca08g01791 742 MobiDBLite consensus disorder prediction 95 126 - -
Cca08g01791 742 PRINTS DnaJ domain signature 458 473 IPR001623 -
Cca08g01791 742 PRINTS DnaJ domain signature 475 495 IPR001623 -
Cca08g01791 742 SMART dnaj_3 435 495 IPR001623 -
Cca08g01791 742 MobiDBLite consensus disorder prediction 643 670 - -
Cca08g01791 742 Pfam Cleavage inducing molecular chaperone 546 643 IPR032843 -
Cca08g01791 742 MobiDBLite consensus disorder prediction 643 665 - -
Cca08g01791 742 MobiDBLite consensus disorder prediction 696 731 - -
Cca08g01791 742 MobiDBLite consensus disorder prediction 390 422 - -
Cca08g01791 742 Gene3D DnaJ domain 424 515 IPR036869 -
Cca08g01791 742 CDD DnaJ 436 492 IPR001623 -
Cca08g01791 742 PANTHER OS03G0832900 PROTEIN 1 742 - -
Cca08g01791 742 Pfam DnaJ domain 436 500 IPR001623 -
Cca08g01791 742 ProSiteProfiles dnaJ domain profile. 436 503 IPR001623 -
Cca08g01791 742 MobiDBLite consensus disorder prediction 70 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01791 Cca-Chr8 50150162 50155664 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01791 1 704 Miscellaneous Gene Families AT5G49580 53.099 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01791 K09534 - gmx:100789594 1241.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01791 08 50150162 50155664 Cca08g01791 08 50150162 50155664 ECH