Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01776 ATGGCTTCTTCGTCTTCAACATCGGGTTCAGCTTCAGGTTCGGCGGTGACGGAGCGAAGAGGAATACCAGGAGCTCAGTTCGTTGAAGATGTTCAAACTTATCTCACTCAATCGGGTCTCGATGTTGGCTCAGCCCTCGCTTTTCTCCAAGAAAGACTTCAGCAATACAAGGTTGTTGAAATGAAGCTTCTTGCTCAGCAAAGGGATCTTCAGGCAAAGATACCAGATATTGAAAAGTGCTTAGACGTTGTTGCTACATTGCAAGCTAAGAAGGGTACTGGTGAGGAACTTATTGCTGATTTTGAAGTATCAGAAGGCATATATTCACGAGCACGCATAGAAGAAACTAATTCTGTGTGTTTATGGCTGGGAGCAAATGTTATGCTGGAATATACATTAGAAGAGGCTACTGGTCTTCTACAGAAGAACCTTGATAATGCTAGAGCCAGTTTGGAAGTTCTTATTGCTGATCTACAGTTCTTGAGGGACCAGGTGACAATTACTCAGGTTACAATTGCTCGCGTGTATAATTGGGACGTTCATCAACGGAGAATTCAACAAGCTGTTGCCACAACTGCTCAAGAATAG 588 0.4337 MASSSSTSGSASGSAVTERRGIPGAQFVEDVQTYLTQSGLDVGSALAFLQERLQQYKVVEMKLLAQQRDLQAKIPDIEKCLDVVATLQAKKGTGEELIADFEVSEGIYSRARIEETNSVCLWLGANVMLEYTLEEATGLLQKNLDNARASLEVLIADLQFLRDQVTITQVTIARVYNWDVHQRRIQQAVATTAQE 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01776 195 Pfam Prefoldin subunit 56 178 IPR004127 -
Cca08g01776 195 PANTHER PREFOLDIN SUBUNIT 3 1 191 IPR016655 GO:0006457|GO:0016272
Cca08g01776 195 Coils Coil 144 164 - -
Cca08g01776 195 SUPERFAMILY Prefoldin 46 175 - -
Cca08g01776 195 PIRSF Prefoldin_3 5 194 IPR016655 GO:0006457|GO:0016272
Cca08g01776 195 Gene3D - 44 192 IPR009053 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01776 Cca-Chr8 49969522 49974220 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01776 - - gmx:100527836 353.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01776 08 49969522 49974220 Cca08g01776 08 49969522 49974220 ECH