Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01769 atggagggcggagaagaaggagtggagaTGGTGGTGGACTCGAAGGACTTACAGCAACAGAGCAAAGCGTTGGACAAACTCACTGACCGCGTCGAAGATCGCCAACTCGATTCCACTCGCGTCCAAGAGGCCATGGCTTCCATCGCTGCTTCCGCCGAGGCTGATCGCAATGCCATGCGCATCAGGGAGAAAGAATTAGCTGCTGTTAAGATCAATGCAGCAGATGTTGATATAATTGCAAATGAACTAGAGTTGGACAAAAAGGTTGCTGAAAGAACTTTGCGGGAACATAAAGGGGATGCAGTTGCCGCCATTCGGCACTTGCTTCACTAG 333 0.4595 MEGGEEGVEMVVDSKDLQQQSKALDKLTDRVEDRQLDSTRVQEAMASIAASAEADRNAMRIREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRHLLH 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01769 110 Coils Coil 17 37 - -
Cca08g01769 110 CDD UBA_HYPK 69 109 IPR038922 -
Cca08g01769 110 PANTHER BNAA05G30770D PROTEIN 1 109 - -
Cca08g01769 110 Coils Coil 80 100 - -
Cca08g01769 110 Pfam HYPK UBA domain 69 109 IPR044034 -
Cca08g01769 110 PANTHER HUNTINGTIN-INTERACTING PROTEIN K FAMILY MEMBER 1 109 - -
Cca08g01769 110 Gene3D - 70 108 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01769 - - gmx:100527445 190.274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01769 08 49844683 49847515 Cca08g01769 08 49844683 49847515 ECH