Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01764 ATGACCATCACAAACTCTTTTCTTCATATCATCTTCGTGTGCTTCATGATGCCCCTTTTTGTATTTAGTGATGAGGGAATGCATTCAGGATCTTCAGCACATATTTTGAATTCTTTCCGTGAAGACAGAAACGGGTCCATAACAGTGTCAGTGAAAGCAGAACATGCATATTCTGCCTCTAGAAAAATTTGGTTGCATGGTTCTTGCACAAGCAAAGACATAAGCATCTCACAAAGCAAAAGTTCTACATCAGGAATACCACAGTTCATTGTGCAAATTGTTAACACCTGTGTTTCTGGATGTGCTCCTTTTGACATCCACCTCCACTGTGGCTGGTTTGCTTCTGCAAGAATAGTGAACCCCAGATTGTTCAAGAGGCTCTCATATGATGATTGCTTGGTGAATAGAGGGAACCCTTTAGCCTCTACTCAGATCATCAGATTCACATATTCCAATTCCTTCATGTACCCTCTTGCTTTTAAGAGTGCCAAATTTTGCTGA 501 0.4072 MTITNSFLHIIFVCFMMPLFVFSDEGMHSGSSAHILNSFREDRNGSITVSVKAEHAYSASRKIWLHGSCTSKDISISQSKSSTSGIPQFIVQIVNTCVSGCAPFDIHLHCGWFASARIVNPRLFKRLSYDDCLVNRGNPLASTQIIRFTYSNSFMYPLAFKSAKFC 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01764 166 PANTHER PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED 10 166 IPR040361 -
Cca08g01764 166 PANTHER PROTEIN TAPETUM DETERMINANT 1-LIKE 10 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01764 Cca-Chr8 49767517 49768769 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01764 - - aprc:113852241 275.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01764 08 49767517 49768769 Cca08g01764 08 49767517 49768769 ECH