Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01727 ATGTCGATCTCCGGTGGCGCCGCCGTCACCGGCGGGAACGTCAGGAGGAACCACCGCTACCTCGGCGCGGACCGTTTCTACTACCCGCCACCGTTGCGGAAATACCGACCAGAACAGGAACATGTGGAGGAGCAAAGGTCAACGTTGTCGGAGAACAGGCCCGGTTCCTCTTCCGCTTGCTCCGTTTCTTCTGAAACAACGCGTGAGGTCTCCAATTTGTGTCGGTTCTTGGAGCACACCACACCGCATGTTCCCGCGCAATATTTTCCCATGGAACAGAGAAGCAAGAGAAGATGGAAAACTATGGAGGGAGAGTGGCATGCGTACTATGTGCTTGGGGATTTGTGGGAATCTTTCAAGGAATGGAGTGCATATGGGGCCGGTGTTCCGTTGGTGTTGGATGGGAGGGAATGCGTCAAACAGTATTACAATGTCTCCTTGTCTGCCATTCAGCTTTATGTTCATCCATCACAACATTTCCCATGGTTAAGTTGGAATCAGCCTAACTTATCAGATGTAAGCACTCATGGTTTGGAAAGAAGTAAACCTCAAACAGGTTCATCAAGTGATGAGATTGAGAGCTGCAGCCCACCTGGTCAGCTTATATTTGAATACTTTGAGCATGAAATACCTTACAATCGTGAACCATTAGCAGATAAGATTTTTTACCTTGCACATCAGTTTCCTGAGCTGAAGACATACCGGAGCTGTGATCTTTCGCCTGCAAGTTGGGTTTCTTTGGCTTGGTATCCAATATACAGAATACCTACTGGTCCCACACTTGAGAGCCTGAGTGCCTGCTTCCTGACCTTCCATTCCCTGTCAACAACTTTGCAAAGTCCAAAGAATGATGGACTTCATGTTAGTTCAAGAGGTAAGGAGTTGTCGTCCAAGCTATCATTACCAATCCTTGGACTTGCCTTTCATAAGTTGAAAGCTTCTCTCTGGGATTCTGATGGTGTTGCTCAAGGTCAGAAAGCCAATTCTCTATTGAGAGCTGCTGATAATTGGATTAGGCTATTGGAAGTTAACCATCCCGATTACAATTATTTTATGTCTCATTATACATATTGGAGATGA 1080 0.4657 MSISGGAAVTGGNVRRNHRYLGADRFYYPPPLRKYRPEQEHVEEQRSTLSENRPGSSSACSVSSETTREVSNLCRFLEHTTPHVPAQYFPMEQRSKRRWKTMEGEWHAYYVLGDLWESFKEWSAYGAGVPLVLDGRECVKQYYNVSLSAIQLYVHPSQHFPWLSWNQPNLSDVSTHGLERSKPQTGSSSDEIESCSPPGQLIFEYFEHEIPYNREPLADKIFYLAHQFPELKTYRSCDLSPASWVSLAWYPIYRIPTGPTLESLSACFLTFHSLSTTLQSPKNDGLHVSSRGKELSSKLSLPILGLAFHKLKASLWDSDGVAQGQKANSLLRAADNWIRLLEVNHPDYNYFMSHYTYWR 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01727 359 MobiDBLite consensus disorder prediction 38 64 - -
Cca08g01727 359 PANTHER OS07G0246600 PROTEIN 19 359 - -
Cca08g01727 359 MobiDBLite consensus disorder prediction 49 64 - -
Cca08g01727 359 PANTHER T15D22.8 19 359 - -
Cca08g01727 359 MobiDBLite consensus disorder prediction 174 195 - -
Cca08g01727 359 Pfam Protein of unknown function (DUF789) 71 351 IPR008507 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01727 Cca-Chr8 49173073 49177112 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01727 - - ccaj:109814982 753.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01727 08 49173073 49177112 Cca08g01727 08 49173073 49177112 ECH