Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01699 ATGGCGAGGAACAACGCCGAACTCGTTACGCAACTCAACGTGACTCAGCACTTCCCCCTTGACTCTCTCCTCCGCTATTGTTCTTCCAACATTTCTGGCTTCCCTCATCCTCCCACCCATTTCGTCGTTTCCCAGTTTGGGCATGGACAGTCCAACCCCACCTACTTGTTGGAAGTGGGTTCTCATGGCTCTGTGCTGAAGCGCTATGTTCTCAGAAAGAAGCCTCCGGGGAAATTGCTCGCTTCAGCTCATGCTGTCGATAGAGAGTTTCAGGTTCTCCAGGCATTGGGCGCTCATACCGATGTTCCGGTTCCTAAGGTTTTCTGTTTGTGCAATGATCCATCTGTTATTGGAACCGCGTTTTACATCATGGAATATTTGGAGGGGCGCATATTTATTGACCCCAAGTTACCGGGTGTGGCACCAGAGAAGAGGAGGGCAATTTACCGGGGAACGGCTAAAGCCTTAGCTTCCTTACATTCTGCTAATGTGGATTCGATTGGTCTGGGAAATTATGGGCGACGCAATGATTATTGCAAAAGACAGATTGAAAGGTGGGCTAAGCAATATGTTGCCTCAACCAGTGAGGGTAAACCTGCAAGCAACCCAAAAATGTTTGCCCTGATTGATTGGCTACGACATCAAATCCCTCCCGAAGATTCTTCAGGAGCAACAGGAGGTCTTGTTCATGGAGATTTTCGCATTGACAATCTCGTGTTCCATCCCACAGAGGATCGAGTAATTGGAATCCTTGACTGGGAACTGTCTACCCTTGGTAACCAAATGTGTGATGTTGCATATAGCTGTTTGCCTTATATTGCAGATATTGGGCTTGATAAAATACAAGAAGGTATGGAACGTGCTGGATTACCTAAAGGAATTCCTTCACTACCAGAATATTTGGCTGATTACTGCTCTTTGTCAGGAAGAAAATGGCCAGTTGCTGAATGGAAGTTTTATATTGCCTTTTCTTTTTTCCGTGCGGCTTCAATTTATGCAGGAGTGTATAATAGATGGGTTAAGGGTAATGCATCAGGAGGTGAGCGTGCTCGATACACAGAAGTACTTGCTAATGGCCTTATAGATGTTGCCTGGGAATTTATTGAACGCAAATCCGTGCTTCCTCAGCACCCTCCCTCTGATGCACATACACGAGACTATTCAAAAGAGTTGGTGAATGGGAATGATATACAGGGCCTCCCAACTCAGGGAAAGTTTGTTCCTAGTCAAAAGGTTTTGGCATTGAGGAACAAATTAATTAAGTTCATGGAGGAACACATTTACCCCATGGAAAATGAATTTTCTAAACTTGCCCAATCAGAATCTCGTTGGACTGTTCACCCAGCAGAGGAAAAGTTAAAGGAGCTAGCAAAGAAAGAAGGCTTGTGGAACTTATGGATTCCTCTTGATAGTGCTGCCAGAGCGAAAAATCTTATCTTTGATGGGAGCAATAATGGTCTCTCTAGTGATGCGAATGACTTGTTGCTGGGTGCTGGTCTAACAAATCTCGAATATGGATACCTTTGTGAGATCATGGGTCGTTCGGTTTGGGCTCCTCAAGTGTTTAATTGTGGTGCACCTGACACAGGTAATATGGAGGTGTTGCTTCGCTATGGAAACAAAGAACAACTACACAAATGGCTAATACCTTTGCTTCAAGGGGAGATTAGGTCTGGATTTGCAATGACAGAACCTAGTGTTGCATCTTCCGATGCAACCAATATTGAGTGTTCTATCAAAAGGCAAGGAGATTCATATATTATCAATGGGACGAAATGGTGGACAAGCGGTGCTATGGATCCAAGATGTAGAATTCTTATAGTCATGGGAAAAACTGACTTCAATGCAGCGAAGCATAAACAGCAATCTATGATCTTAGTGGATGTCCAAACTCCTGGTGTTCGTATAAAGAGACCATTGACAGTGTTTGGCTTTGATGATGCTCCTCATGGGCATGCAGAAGTAACATTTGAAAATGTTCGTGTGCCAGCGAAAAACATAATACTGGGGGAAGGACGTGGATTTGAGATTGCTCAAGGTAGGCTTGGTCCTGGAAGGCTGCACCATTGTATGAGACTGATAGGTGCAGCTGAGCGAGGCATGCATTTGATGGTTCAAAGAGCTGTTAGTAGAAGAACATTTGGGAAGCTGATTGCTCAACATGGTTCATTTCTTTCAGATATGGCCAAGTGCCGAATAGAGCTAGAGAGGACCAGATTGTTAGTGTTGGAAGCAGCTGACCAACTCGATAGGCATGGGAACAAAAAAGCTCGAGGGATATTAGCAATGGCAAAGGTAGCCGCCCCAAACATGGCACTGAAGGTGCTTGACATGGCAATGCAAGTGCATGGAGCAGCTGGTGTATCATCTGACACAGTCCTGGCACATCTCTGGGCTACTGCAAGGACACTAAGAATTGCAGATGGTCCAGATGAAGTCCACTTGGGCACCATAGCCAAGTTAGAACTACAGAGAGCCAAGCTTTGA 2487 0.4507 MARNNAELVTQLNVTQHFPLDSLLRYCSSNISGFPHPPTHFVVSQFGHGQSNPTYLLEVGSHGSVLKRYVLRKKPPGKLLASAHAVDREFQVLQALGAHTDVPVPKVFCLCNDPSVIGTAFYIMEYLEGRIFIDPKLPGVAPEKRRAIYRGTAKALASLHSANVDSIGLGNYGRRNDYCKRQIERWAKQYVASTSEGKPASNPKMFALIDWLRHQIPPEDSSGATGGLVHGDFRIDNLVFHPTEDRVIGILDWELSTLGNQMCDVAYSCLPYIADIGLDKIQEGMERAGLPKGIPSLPEYLADYCSLSGRKWPVAEWKFYIAFSFFRAASIYAGVYNRWVKGNASGGERARYTEVLANGLIDVAWEFIERKSVLPQHPPSDAHTRDYSKELVNGNDIQGLPTQGKFVPSQKVLALRNKLIKFMEEHIYPMENEFSKLAQSESRWTVHPAEEKLKELAKKEGLWNLWIPLDSAARAKNLIFDGSNNGLSSDANDLLLGAGLTNLEYGYLCEIMGRSVWAPQVFNCGAPDTGNMEVLLRYGNKEQLHKWLIPLLQGEIRSGFAMTEPSVASSDATNIECSIKRQGDSYIINGTKWWTSGAMDPRCRILIVMGKTDFNAAKHKQQSMILVDVQTPGVRIKRPLTVFGFDDAPHGHAEVTFENVRVPAKNIILGEGRGFEIAQGRLGPGRLHHCMRLIGAAERGMHLMVQRAVSRRTFGKLIAQHGSFLSDMAKCRIELERTRLLVLEAADQLDRHGNKKARGILAMAKVAAPNMALKVLDMAMQVHGAAGVSSDTVLAHLWATARTLRIADGPDEVHLGTIAKLELQRAKL 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01699 828 Pfam Acyl-CoA dehydrogenase, C-terminal domain 672 820 IPR009075 GO:0016627
Cca08g01699 828 PANTHER MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED 1 828 - -
Cca08g01699 828 SUPERFAMILY Acyl-CoA dehydrogenase NM domain-like 406 685 IPR009100 GO:0016627
Cca08g01699 828 SUPERFAMILY Acyl-CoA dehydrogenase C-terminal domain-like 670 824 IPR036250 GO:0016627
Cca08g01699 828 Gene3D - 129 372 - -
Cca08g01699 828 CDD ACAD10_11_N-like 43 308 IPR041726 -
Cca08g01699 828 Pfam Phosphotransferase enzyme family 43 270 IPR002575 -
Cca08g01699 828 Gene3D Phosphorylase Kinase; domain 1 20 128 - -
Cca08g01699 828 Gene3D - 558 672 IPR046373 GO:0016627
Cca08g01699 828 Pfam Acyl-CoA dehydrogenase, N-terminal domain 414 555 IPR013786 GO:0016627|GO:0050660
Cca08g01699 828 SUPERFAMILY Protein kinase-like (PK-like) 42 343 IPR011009 -
Cca08g01699 828 Gene3D - 673 827 - -
Cca08g01699 828 Gene3D - 407 557 IPR037069 GO:0016627|GO:0050660
Cca08g01699 828 PANTHER ACYL-COA DEHYDROGENASE IBR3-RELATED 1 828 - -
Cca08g01699 828 Pfam Acyl-CoA dehydrogenase, middle domain 559 660 IPR006091 GO:0016627
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01699 1 826 Acyl Lipid Metabolism Gene Families AT3G06810 76.082 0.0 1314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01699 K00249 - gmx:100788184 1550.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01699 08 48773725 48781626 Cca08g01699 08 48773725 48781626 ECH