Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01696 ATGACTAAGGGCATCTCGGATCCCGGTGGGAGTGGAGGCGGTGGCTTCCACGAGGTTCACGCGGAGCGTGACCTAGAATCCAATTGGGAAGTTGACCTCGCCAAGAAGCTTGAGGAGTATCTTCTGAAAATTTGCTCCGGCGAGATAACCAGCGAAGAAGAAGGACATATTCCTGTTAATTTCGCCGAAGCTGCTCTGCTGCTTCAGGGTTCCATACAGGTGTATAGTCGAAAGGTCGAGTATCTCTACACCTTGGTCTTGCGTGCTTTGGAGTTTCTTTCTCAGAAAAGACAGCAAGATCATATTGATGGAACATCTGTTCAACCTGAAGAAAATGGTGGCTGTGCAGTTGCTGGTGAAGAAAATGATCAATTTTGGGGCTTAGATGAAATCCCAGTTGAAGAAAAGAATTCCTTGGATGGTACAGCAGGCAAAGAAGTGAATTTGGATCACTTTATAAAACCTCCTGCAAATCTAGTTGTTCTTGAGGGTGACTGCTTTGATTCTGGTGGTGATGGAGGGGAATTGGAGTCTTTTCTGTTGTCCACCACAAACCTGTACCAGGACTTTATTTTATTGGACATGTCTGATGCTGTTGCAGTTAATGAGTTTCTTAAGGGAAGCAATGCTGCCACAACTCAAAAAGATATTAACAGAGATACCTCAACTCGTAAAAGCTTTCTTTCTCCCACACGTTCTGGTGGAAGTGCTCGTAGATTATCGGCTGCTAAGAGTCAGTTTGCTACTTCCAACTGCTCTCCTAAACATAATTGTAGTTCTGATGCCGAAAATATTCAGCCTAGTTCTCCTGCTTCTGCTGGTCTTAATGACTGCAACTATGGATTTAATATGGATGGTGGATGTGATGCATCTAGGGATTCAGACAATTCAGATGACAATAATGATGATCCATGGAAACCTTTGAATCCTCATGAACAGGGCAACTTGAGGGTGAAGCCATTCAGAAAAGTGAAATCTTTAAAAAAGAACAACTTCAATGTAAGACAACCAGTTACGATGAGCACCTTGTTTCCACTTGCAAAATTGCATGGTCCTATCAGTCCAGAGCTCATGGAAATGTGGGAGATGCGACAACATGTGCATGAACGACAATGGGATTCTCAACCTCCATTATATGAGAAGCTGAGGCAATCTCTGATTAATGAGGGGAATGAAACTGGTGGAACATTTTTCAACTCGGGGGCtgacaatgaagacaatgacaatgaatatgaTAGTGGAAATCATGATTTTGATATACCAGACAATGCTTACATGGAAGAAGATATACCTCCTTTCCGTAAAGAGGATGAATTTGAGGACGTTCATTTCAACATTGATGAAGCTATAGATCTTTCTCAGGCTAGTTTGGAAGATCTTTGCCGCTCTCACCTGAATGCTCTCTTAGCTAGCATTGCTGAATCTGAGAAGCAAACTGAAATGGCTGCTAGAGTTTCAACGTGGAAACAAAGAATTGAGCACAACTTGGAAGAACAGGAATCACATCCACCATTTGATATCCAAGACTATGGTGAGAGAATTCTTGACAAGTTCTCCTTGCTCTCCCTTGAACCAAGCAGTAGCGGTGTCCTATCCTTTTCTGATTTGGTCGGGGGTCAAGAGAAGTATGATGTGGCCCGAAGTTTCTCTTCCCTTCTTCAACTGGTAAACAATGGAGAAGTAGCTCTAGAAAGAAATGGAGTTGATGGGGTGTCTGTGTGCTACGCTTCTGAAAATCCCTTTCATGTTAGGCTCCTCAAGCGGGCTAAGGAAAGGGAGGATGGCCAGATTCTTTTGCCGAAAAAGAGAGCAAAGTCTCCAACAAAAAAGCCCTCTAATAAAGGTCACAAGAACAAAGCCGAAATAGAAAGAGAAAGGTCTTCCTCATCTTCTAGGAAATATGGATCAACTGGGTTGTCACCACCAGCAAATTGTAAGTTTTCTGTAAAGCTTGGAAAGGTGAGTGCCATAAGATTATCTCCCGAATCCAAAAGAAGGAGGAGATCTCAGTATGTTGAACCGGTTAACTTACATTCAGCAGGGTGA 2046 0.4247 MTKGISDPGGSGGGGFHEVHAERDLESNWEVDLAKKLEEYLLKICSGEITSEEEGHIPVNFAEAALLLQGSIQVYSRKVEYLYTLVLRALEFLSQKRQQDHIDGTSVQPEENGGCAVAGEENDQFWGLDEIPVEEKNSLDGTAGKEVNLDHFIKPPANLVVLEGDCFDSGGDGGELESFLLSTTNLYQDFILLDMSDAVAVNEFLKGSNAATTQKDINRDTSTRKSFLSPTRSGGSARRLSAAKSQFATSNCSPKHNCSSDAENIQPSSPASAGLNDCNYGFNMDGGCDASRDSDNSDDNNDDPWKPLNPHEQGNLRVKPFRKVKSLKKNNFNVRQPVTMSTLFPLAKLHGPISPELMEMWEMRQHVHERQWDSQPPLYEKLRQSLINEGNETGGTFFNSGADNEDNDNEYDSGNHDFDIPDNAYMEEDIPPFRKEDEFEDVHFNIDEAIDLSQASLEDLCRSHLNALLASIAESEKQTEMAARVSTWKQRIEHNLEEQESHPPFDIQDYGERILDKFSLLSLEPSSSGVLSFSDLVGGQEKYDVARSFSSLLQLVNNGEVALERNGVDGVSVCYASENPFHVRLLKRAKEREDGQILLPKKRAKSPTKKPSNKGHKNKAEIERERSSSSSRKYGSTGLSPPANCKFSVKLGKVSAIRLSPESKRRRRSQYVEPVNLHSAG 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01696 681 MobiDBLite consensus disorder prediction 594 681 - -
Cca08g01696 681 Pfam Condensin II complex subunit CAP-H2 or CNDH2, C-term 304 594 IPR031737 -
Cca08g01696 681 MobiDBLite consensus disorder prediction 291 306 - -
Cca08g01696 681 MobiDBLite consensus disorder prediction 289 320 - -
Cca08g01696 681 MobiDBLite consensus disorder prediction 390 417 - -
Cca08g01696 681 Pfam Condensin II complex subunit CAP-H2 or CNDH2, N-terminal 17 131 IPR009378 -
Cca08g01696 681 MobiDBLite consensus disorder prediction 614 630 - -
Cca08g01696 681 MobiDBLite consensus disorder prediction 215 270 - -
Cca08g01696 681 Pfam Condensin II complex subunit CAP-H2 or CNDH2, mid domain 154 299 IPR031719 -
Cca08g01696 681 PANTHER CONDENSIN-2 COMPLEX SUBUNIT H2 8 669 IPR031739 GO:0030261
Cca08g01696 681 MobiDBLite consensus disorder prediction 390 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01696 Cca-Chr8 48730043 48736305 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01696 K11490 - gmx:100786571 1085.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01696 08 48730043 48736305 Cca08g01696 08 48730043 48736305 ECH