Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01693 ATGTGCCAAACCTTCGGCGAAATTAACAGGAATATGTCCTTCTTCTTCGCTGGTTATCTCGCCGGAGCAAATTTTCAGAAGATACTCCTCAAGCTTCTTGGCGAGCCACCGCCTCCACTCGCTCCGCGTGCAAATCATGATAGATCGCAACTTCCCCTATTCGCTTTTAGTTGGTGGGATGACAAGGGAACATTCCATGCCGGTGACACAGCCACCATCAAAGTCAAAGTGCTTGAGAATGCTGATAAGATTGACAGAAAAACTTTTAACCCCATTCTAACTGTGAATGGAAAGGAAGGGAACAGTTCCTACGTTTCTACTGTGTTGTCAAATTTCCTAGGAGACCCAAATGAATGGAAGATTTCCTTCACCCCCATCAGGGTTGGATTGTTTAATGTCCTCATCAACGAGGATCGTTATAAAGTTTCTGACTCATCCTTGCATTTCCAAGTTGAACCAGGGAACATGTACCCGTCTGTGTGCGTTGCATCATGGAAGGGCGTGAAGCATGAATACGAGGCTGGTTCAAAAGCTACAATTATGGTGCTCCTTAAAGATGCATTTGGGAACCATATCTCTAAGACGAGTCAAGTGTCCTATTTGCCTGATTTTAAGTTGTATGTGCTGCATGAAAATGGTTCTGTTGCGAGTGTTCCAGATATCTCTAACATGGGATGGAATGATTTTGACTATGTAGTCATTGAGTTTGTTGTGACCAAAGCTGGGAAGTTTTCCTTGAGCTTAGAAGGAGGAAATCAAACCTTGAATGGTTCTCCATTACCATTGAAGGTGAATCCAGGAACAATAGATGTCTCTAACTGTATCGCAAAATGGAACATTGAACCACATGCATGGCAATTGGCGTCCAAGATGGAAATATTTATACACCAGTTAGATCAATATGGAAATCTGGTTTCTGGACTGTATCCTTTTGATTCAGAAGTTGTTGAACGAGATACAAACTTGTCAATACCGATAGCAGATCTTCACTTTGAGGAAGTGGATGCTGGAATTCAGTTGTTTTCATTTAGCAATTTGGAGCCAGGGAACTTTCTATTGACAATATACGATTCCAAGCATAATAAAAGCATTTCCAATATGCCATACGTTTATAGAGTTTTTATAGGTTATTGTGATGGAGTTAAAAGTGTCGTTAATGGATCCGGTTTAAATGATTCAGTAGCTGGGGTAAGGGCAGAATTCTCTGTTTATTTGAATGACATCTATCAATATCCTTCCCCAATTGAAGCTGACATACTTCAAGTGCAAATTTTAAGAGAAAATGACTCCTACAGCATTTCGCCAATCATATATCCTATGCTAAACAAAAATGGGAGCAGAATAGCTTCTGGAATGAGATATGATGGTATCAGTTACATGGATACCGCGCCATCACCTTCAATAGAGTTGAGCAACAATTCTATTGGGAACGGGAGCTTTGTCATTTCCAGTGATTTTCAAGTGGATTACATACCAGAAAAAAGTGGCTTTTATGATATTAACGTATATTGTGGAAACATAGTATTGAATGAGGGGCATTCATTCAGAAAAGAGGTAAAAGCAGGTGAAGTAAATGTTTCCTTGTCAAGTGTTGTGAGGTTTTCTTCAAAGGTGTCAAAGCTGTCCACAAATGAAATAGTTGTGCTGCTTATGGATTCATATTTAAACCCTGTCCTCTCGCAACAATCAAGGTTGAAATTGGAGATTGCTTCTTCTAATAGTTCTGGCTTTTCAACTTTAAACATTACGGATAATAAGGATGGATCATACAACTGTAGTTACATGGCCAAAGATGTCGGCACTTACGAGATTTGTGCTTCCTTTGATGGCAAGCGTTTCTTGTCATGTCCCTTCAGCATCAATGTGTACAGCAGCGAATATTTTCCCAAAGCTAACAATGACACAATATCTATTTGGGAGGATCAATCCATTGCCTTTGATGCCTTAGCAAATGATTATTTTGCGGGTGATAATGCAAGCATAGTTGAATTCTCAAAATCAGATCATGGTTCACTTATACAGAACGGAAGGATCTTTCGTTACACTCCTTATAAAGGGTATTATGGAAACGATTCTTTTTGGTATACAATTTCTGATATAAATGGAAATCTTGCTTCTGCTTCTGTGTACATATTTGTCCTCAATGTTCCACCTCAGTTTGTTTCTGTTCCAAATCAACTGCAAGCAACAGAAGATATGATAAGCCCTAGATTTGGTGGTTTCACCGGGTTTGAGATAACTTATTCAAATCCAATGGAGAATATTTCTGTCAATCTGAGTGCACAATCTGGAAGTATACATCTGTCTCCTATGGCAATGCAATTTGGGAAAGTAATGTGGAGTGAACTTACAATTAACTTAGGAAATGATACAGCAACAAGTTTACTAATAGAAGGCTCTGTGGAAGTAATTAATTTTGCGCTTCAGTCAATTCAGTATCTGGGAAATGAAAATTTTTATGGTGAAGATACCATTCAAGTCTCTGCCAGGAATAAGAATGGAGTAAATTCATTAGGTGTTCCAATTTTTGTTGATCCTATTAATGACCCTCCGTTTATTGTGGCCCCCTACTTCATCATATTGAGGAGTAATGAAGATGAGACCCTTATCTTTGACCATGAGAAAGATAAGTTTGACTTTTTCATTGGAGATCCCGATCATCTTACCTTCCCTGGTGGTCAGGCTCATTTTTTTGTGACGTTCTCTATGGAAGTAAATGATGGATGGTTAGTAACAAATTTACCAGTTCATCTGATCAATACAACTGAACTGAAGCACAGAATTAATTATCAATGGCAACCTCTTCAGACATATGTTACTATCTCAAAGCACTTTATGGTCAAAGCTCATGGAATCAGATTTCAGGGCACAGTCAATGACTGCAATAGTGTTATGCAGCAACTTTTCTATCATGGAGGTGAGCATGGAGCTGTTTTAACATTGACATTAAATGACATGGGAAACTATGGATGTTATCCAGATTGTGCAGATGGGATGTCAATGCCATTATATACTGAAGCTACGGTTAATTTAATGAGAAAACAACCAATGAGTTCATTTCTTGCTCACACCTTGGGATCAATCATTGTCATTGAATTTGTTATCATGTTCTCTCTTGGATTGTTGCTTTTGTACTTCACATGTAAATGTGCAATTCTTCTTGCACATGAAAGAAGAAACCGCGAGAAAAAATCTTCAGAGCTATCTACCGTGCAAAGTTCCCACACAGAAACTTCGAGCATAAACATATCTGACAATGCCACCCATTTCACTGATTGTTGTTCAAGACCCTCCTTGATTCGTTTTGGTATGCAATCCTCCAACTTTCGCCAAAGGTGTGGTCGTCTATTTCAAGTTGGAGAATCCAGTAAGGCAGAAAATGAATGCTCTTCAACAAGTGAAACCAATAGCAGAAACTTGTGCCTACCTCTACCCTCTTGA 3441 0.3897 MCQTFGEINRNMSFFFAGYLAGANFQKILLKLLGEPPPPLAPRANHDRSQLPLFAFSWWDDKGTFHAGDTATIKVKVLENADKIDRKTFNPILTVNGKEGNSSYVSTVLSNFLGDPNEWKISFTPIRVGLFNVLINEDRYKVSDSSLHFQVEPGNMYPSVCVASWKGVKHEYEAGSKATIMVLLKDAFGNHISKTSQVSYLPDFKLYVLHENGSVASVPDISNMGWNDFDYVVIEFVVTKAGKFSLSLEGGNQTLNGSPLPLKVNPGTIDVSNCIAKWNIEPHAWQLASKMEIFIHQLDQYGNLVSGLYPFDSEVVERDTNLSIPIADLHFEEVDAGIQLFSFSNLEPGNFLLTIYDSKHNKSISNMPYVYRVFIGYCDGVKSVVNGSGLNDSVAGVRAEFSVYLNDIYQYPSPIEADILQVQILRENDSYSISPIIYPMLNKNGSRIASGMRYDGISYMDTAPSPSIELSNNSIGNGSFVISSDFQVDYIPEKSGFYDINVYCGNIVLNEGHSFRKEVKAGEVNVSLSSVVRFSSKVSKLSTNEIVVLLMDSYLNPVLSQQSRLKLEIASSNSSGFSTLNITDNKDGSYNCSYMAKDVGTYEICASFDGKRFLSCPFSINVYSSEYFPKANNDTISIWEDQSIAFDALANDYFAGDNASIVEFSKSDHGSLIQNGRIFRYTPYKGYYGNDSFWYTISDINGNLASASVYIFVLNVPPQFVSVPNQLQATEDMISPRFGGFTGFEITYSNPMENISVNLSAQSGSIHLSPMAMQFGKVMWSELTINLGNDTATSLLIEGSVEVINFALQSIQYLGNENFYGEDTIQVSARNKNGVNSLGVPIFVDPINDPPFIVAPYFIILRSNEDETLIFDHEKDKFDFFIGDPDHLTFPGGQAHFFVTFSMEVNDGWLVTNLPVHLINTTELKHRINYQWQPLQTYVTISKHFMVKAHGIRFQGTVNDCNSVMQQLFYHGGEHGAVLTLTLNDMGNYGCYPDCADGMSMPLYTEATVNLMRKQPMSSFLAHTLGSIIVIEFVIMFSLGLLLLYFTCKCAILLAHERRNREKKSSELSTVQSSHTETSSINISDNATHFTDCCSRPSLIRFGMQSSNFRQRCGRLFQVGESSKAENECSSTSETNSRNLCLPLPS 1146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01693 1146 Gene3D Immunoglobulins 371 527 IPR013783 -
Cca08g01693 1146 SUPERFAMILY E set domains 157 274 IPR014756 -
Cca08g01693 1146 Gene3D - 629 710 - -
Cca08g01693 1146 PANTHER JITTERBUG, ISOFORM N 211 1022 - -
Cca08g01693 1146 PANTHER JITTERBUG, ISOFORM N 41 155 - -
Cca08g01693 1146 Pfam Bacterial Ig domain 619 702 - -
Cca08g01693 1146 Gene3D Immunoglobulins 541 628 IPR013783 -
Cca08g01693 1146 ProSiteProfiles Filamin/ABP280 repeat profile. 516 622 IPR017868 -
Cca08g01693 1146 SUPERFAMILY E set domains 543 625 IPR014756 -
Cca08g01693 1146 Pfam Filamin/ABP280 repeat 545 618 IPR017868 -
Cca08g01693 1146 Pfam Filamin/ABP280 repeat 377 506 IPR017868 -
Cca08g01693 1146 SUPERFAMILY E set domains 378 507 IPR014756 -
Cca08g01693 1146 PANTHER JITTERBUG, ISOFORM N 211 1022 IPR044801 GO:0030036|GO:0051015
Cca08g01693 1146 PANTHER JITTERBUG, ISOFORM N 41 155 IPR044801 GO:0030036|GO:0051015
Cca08g01693 1146 Gene3D Immunoglobulins 155 270 IPR013783 -
Cca08g01693 1146 ProSiteProfiles Filamin/ABP280 repeat profile. 375 519 IPR017868 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01693 - - ccaj:109808168 2203.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01693 08 48686614 48696111 Cca08g01693 08 48686614 48696111 ECH