Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01689 aTGAACGAAGACGCCAAAAAGAGCACTCCCGGACCTCTAACGGCGAGGCCCGGCCCCGATGACCGGAAACCGTTATCGTTGCCGTCAACGGCGCCGCCCGTCCCCCCGAAGAAGGTCATCATCAAGAGCGCCGACATGATCTCCGACATGCAGAAGGAGGCCGTTGATATCGCCGTCGCCGCGTTTGAGAAGTACAATGTGGAGAAAGATGTTGCTGAGCAGATAAAAAAGGAGTTCGATAAGAGGCATGGCCCCACTTGGCATTGCATCGTTGGTCGTAATTTTGGCTCATATGTGACTCATGAAACAAACCACTTTGTTTATTTCTATTTGGATCAGAAAGCGGTTTTACTATTTAAATCTGGCTAA 369 0.5014 MNEDAKKSTPGPLTARPGPDDRKPLSLPSTAPPVPPKKVIIKSADMISDMQKEAVDIAVAAFEKYNVEKDVAEQIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01689 122 ProSitePatterns Dynein light chain type 1 signature. 88 102 IPR019763 GO:0005875|GO:0007017
Cca08g01689 122 PANTHER DYNEIN LIGHT CHAIN 27 122 IPR001372 GO:0007017|GO:0030286
Cca08g01689 122 SMART Dynein_light_2 34 121 IPR001372 GO:0007017|GO:0030286
Cca08g01689 122 Pfam Dynein light chain type 1 38 121 IPR001372 GO:0007017|GO:0030286
Cca08g01689 122 PANTHER DYNEIN LIGHT CHAIN 27 122 - -
Cca08g01689 122 MobiDBLite consensus disorder prediction 1 37 - -
Cca08g01689 122 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 36 122 IPR037177 GO:0007017|GO:0030286
Cca08g01689 122 SUPERFAMILY DLC 34 122 IPR037177 GO:0007017|GO:0030286
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01689 Cca-Chr8 48615638 48621064 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01689 K10418 - gmx:100805882 221.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01689 08 48615638 48621064 Cca08g01689 08 48615638 48621064 ECH