Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01683 ATGGCACGCTCTTTCTCTCTACCCAAACGCGCCCTTTCCCTTGCTCTTCAACGGCGAGGGTACGCAGTGGCGTCTTCAGATGTTTGTTCGGTGAGGGGGGGTTTGGATAGGATTCGGGGTAGGAGCGGAATAGTGGAAGAGAAAAGTGCCACAAAACATGGTTTGGGCCCTTCGGCTTGGGGCCCAGACCCTGTGACGGGTTACTACAGGCCCATCAATCACACCGATGAGATTGACCCGGTGGAGCTCCGACAGATGCTGTTGAACCACAAAGTTAGATCCTAG 285 0.5474 MARSFSLPKRALSLALQRRGYAVASSDVCSVRGGLDRIRGRSGIVEEKSATKHGLGPSAWGPDPVTGYYRPINHTDEIDPVELRQMLLNHKVRS 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01683 94 Pfam Late embryogenesis abundant protein 5 88 IPR004926 -
Cca08g01683 94 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 2 94 - -
Cca08g01683 94 PANTHER LATE EMBRYOGENIS ABUNDANT PROTEIN 2-RELATED 2 94 IPR004926 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01683 Cca-Chr8 48547831 48548694 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01683 - - gmx:100776073 125.176