Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01669 ATGGCACTCAGACCTATCGATAACGCTCTTCCAACAACCCCAGAGAGACCCAAAAAACAACCCAAGATCGCAATTGTAGCAACCCAAAAACAACAAGACCGTGCTAATGGCGAAAACCAAGCTCCGTTGCCCTCATCTGGGGATGCCACTGTTGACTATGTCTCCTCCGACAACCTTAAACCCTTGTCGGACCCCCAATTCAAGATTCAGAGTTTGGTTGAGGATTTGGATTCAAAAAATTGGACCATAGTGTGTGAGTCGCTGAACGATGCTAGGCGCTTCGCGTTGTACCACTCCTCTCTTCTGTTCCCCATCTTGGGAAAAATTGTGTTGGTGGTGGCGAAGACAATGAGGAACCCTCGCAGTGCTCTGTGCAAAACCGCTATTATGGCTGCTGCTGATATTTTCAATGCTTTTGGTGACAAGTTGCTTGACCCCTCTACTTCTGATGCATTTGATGGCTTGctgctgcagctgctgctgAAGGCATCCCAAGATAAAAGGTTTGTCTGTGAAGAAGCTGATAGGGCACTTTGCTCAATGGTGGGTTGCATGACCCCTCTTCCAATGCTTCAGAAACTGAGGGTTTATGTGAGTCATAAAAACCTTAGGGTCAGGGCCAAGGCTGCTGTTTCTCTCTCCAACTGTGTCTCCAAGATGGGGCTTGAACAAATGGAGGAGTTTGGATTGGCTGAACTGATTGAAGTGGCAGCGGATTTACTGAATGATAGGCTTCCAGATGCAAGAGATGCAGCACGAAGTATTGCAACTTCAATGTGTGAGGCAATGACAAAGGACTCAGAAGAGAAGATGGAGTTGTGGCAGAGCTTCTGCCAATCCAAGTTATCACCAATTCATGCTCTTTCAGTTCTGAAGATAGTTAAGCCCTAA 891 0.4568 MALRPIDNALPTTPERPKKQPKIAIVATQKQQDRANGENQAPLPSSGDATVDYVSSDNLKPLSDPQFKIQSLVEDLDSKNWTIVCESLNDARRFALYHSSLLFPILGKIVLVVAKTMRNPRSALCKTAIMAAADIFNAFGDKLLDPSTSDAFDGLLLQLLLKASQDKRFVCEEADRALCSMVGCMTPLPMLQKLRVYVSHKNLRVRAKAAVSLSNCVSKMGLEQMEEFGLAELIEVAADLLNDRLPDARDAARSIATSMCEAMTKDSEEKMELWQSFCQSKLSPIHALSVLKIVKP 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01669 296 Gene3D - 46 283 IPR011989 -
Cca08g01669 296 PANTHER CLASP 4 294 - -
Cca08g01669 296 SMART TOG_3 58 288 IPR034085 -
Cca08g01669 296 MobiDBLite consensus disorder prediction 25 50 - -
Cca08g01669 296 Pfam CLASP N terminal 102 273 IPR024395 -
Cca08g01669 296 SUPERFAMILY ARM repeat 68 280 IPR016024 -
Cca08g01669 296 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 4 294 - -
Cca08g01669 296 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01669 Cca-Chr8 48413418 48415274 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01669 - - gmx:100819367 509.99