Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01661 ATGTCTGGGGTATGGGTTTTCAAGAACCATGTGGTGAGGCTAGTGGAGAACCCTGGTTCTGAAAGGAAGGTGTTGGTTCACACTGCGAGCAATGAAATCATAACCTCGTATGCAGTGTTGGAGCACAAGCTGAACTCGTTGGGGTGGGAGCGTTACTACGATGACCCTGATTTGCTTCAGTTCCACAAACGCTCCACCGTTCACCTAATCTCTCTCCCAAGGGATTTCAGCAAGTTCAGGTCCATCCACATGTATGACATAGTCGTCAAGAACAAGAACTACTTCGAAGTTAGGGACATGTAG 303 0.4785 MSGVWVFKNHVVRLVENPGSERKVLVHTASNEIITSYAVLEHKLNSLGWERYYDDPDLLQFHKRSTVHLISLPRDFSKFRSIHMYDIVVKNKNYFEVRDM 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01661 100 PANTHER FLOWERING-PROMOTING FACTOR 1-LIKE PROTEIN 3 1 100 - -
Cca08g01661 100 PANTHER FLOWERING-PROMOTING FACTOR 1-LIKE PROTEIN 1 1 100 IPR039274 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01661 Cca-Chr8 48321397 48322224 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01661 - - gmx:100815630 200.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01661 08 48321397 48322224 Cca08g01661 08 48321397 48322224 ECH
Cca11g02783 11 55174676 55175782 Cca08g01661 08 48321397 48322224 PCT