Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01651 ATGCCTCCCGTACCCATTACTCCAATTAGAGTTGGTCACATTGATGATGTCCAAGAGCTAAGGAAAACTAAGCCAAGGACAATTCCTCAAAGATTTGTACGAGACATGCCAGAAAGACCAACACTTACTACTACACCTCTTCCCCCACCACATAGTCACATGCCTATCATTGATTTCTCTAAGCTTAGCAGAGGGAACAAAGAGGAAGTCCTCACTGAGATTTTCAATCTTGCAACTGCTTGTGAGGACTGGGGATTTTTTCAGGTAATTAATCATGAGGTTGACCTCAACCTGCTACATAGCATAGAGAACCTGAGTAGGGAGTTTTTCATGCTACCTTTGGAAGAGAAACAGAAGTACCCTATGGTTCCAGGTACAGTCCAAGGGTATGGACAAGCTTTTGTTTTCTCAGAGGACCAGAAGTTGGACTGGTGCAACATGTTTGCTCTTGGAATTGAACCTCAGTATGTTAGGAACCCAAATCTGTGGCCAAAGAGACCAGAAAGATTTAGTGAAACTGTGGAAGAGTACTCAGGAGAAATAAGAAAACTGTGCTATAATCTGTTGACATACATAGCTTTAGGCCTTGGTTTAAAGGGGGATGTGTTTGAGAAGATGTTTGGTTTATCAGTGCAAGCCATAAGGATGAACTACTACCCTCCGTGTTCCAGACCAGACCTTGTTCTGGGGCTGAGTCCCCATTCAGATGGAAGTGCCCTCACTGTGCTGCAGCAAGCAAAGGGAGGCCCAGTGGGGCTTCAGATACTCAAGGACAATACATGGGTTCCTATTCACCCAATTCCAAATGCTCTTGTCATAAACATTGGAGACACAATAGAAGTTCTTACAAATGGAAAATACAGGAGTGTGGAGCATAGAGCTGTAGCTCATGAGGAAAAAGATAGACTCTCAATTGTGACATTTTTTGCTCCTAGCTATGATGTAGAGCTTGGTCCAATGCAAGAATTTGTAGATGAAAACCACCCATGCAAGTTTAGAAGATACAATCACGGGGAGTACAGTAAACACTATGTAACAAACAAGTTACAAGGAAAAAAGACCCTGGACTTTGCCAAGATCCAAACCAAAAACACAAACTAG 1101 0.4278 MPPVPITPIRVGHIDDVQELRKTKPRTIPQRFVRDMPERPTLTTTPLPPPHSHMPIIDFSKLSRGNKEEVLTEIFNLATACEDWGFFQVINHEVDLNLLHSIENLSREFFMLPLEEKQKYPMVPGTVQGYGQAFVFSEDQKLDWCNMFALGIEPQYVRNPNLWPKRPERFSETVEEYSGEIRKLCYNLLTYIALGLGLKGDVFEKMFGLSVQAIRMNYYPPCSRPDLVLGLSPHSDGSALTVLQQAKGGPVGLQILKDNTWVPIHPIPNALVINIGDTIEVLTNGKYRSVEHRAVAHEEKDRLSIVTFFAPSYDVELGPMQEFVDENHPCKFRRYNHGEYSKHYVTNKLQGKKTLDFAKIQTKNTN 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01651 366 Pfam non-haem dioxygenase in morphine synthesis N-terminal 55 165 IPR026992 -
Cca08g01651 366 PANTHER PROTEIN SRG1 10 363 - -
Cca08g01651 366 SUPERFAMILY Clavaminate synthase-like 16 352 - -
Cca08g01651 366 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 10 363 - -
Cca08g01651 366 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 210 311 IPR005123 -
Cca08g01651 366 Gene3D - 12 352 IPR027443 -
Cca08g01651 366 Pfam 2OG-Fe(II) oxygenase superfamily 212 310 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01651 Cca-Chr8 48051351 48054044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01651 54 360 Glycosyltransferase AT5G59530 36.508 8.40e-53 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01651 - - gmx:100785152 697.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01651 08 48051351 48054044 Cca08g01651 08 48051351 48054044 ECH