Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01646 ATGGGGTATTGGAAGTCTAAGGTTCTTCCCAAGATCAAGAAGGTTTTTGAGAAGAATAGTACCAAGAAAGCTGCTGCAGCTGCTGAAGCCTCTAAGTCCTTTGATGAGTCTAAGGAGGAATACAACAAAACCTTTGAAGAAAAGAAGACTGAACTTCAAACTAAAGTAATTGAAATATATGAAGCTTCATCAACTGAAATCAAGGGTTTGGTTAAAGAACGCAATGAAGATGGGCTAAAGAAGAACTCCACAGAAGTCCACAAGTTCCTAGAAGAGCTTGTTAAAATTGATTTCCCTGGATCAAAGGCAGCATCTGAAGCATCTTCCAAATTTGGACCAGCCTTGGCTTCAAGCTCGGTTTTCTTTGTGTTTGAAAAGGTGTCCACTTTCATTGTGACAGAAGAGAAAGAGAAAGTTGAAGGTGTTGAAGCCACTTCTGCAGAAACTAAAACAGAAGAAGAAACAACTAGCGTGAAAGAGAGGGAGATAGTGGTTgaagaggagaaaaaggaagaggaagagaaaCCCCAAGAAATAGAGACAAGTGCTGAGAAAAAGGTGGAAGAAGAAAAACCAGATGAACCTGCTGCTAAAGAGGAAGAGAAACCGGCTGAACAAGCAGAACCACCAAAGCCTTGA 639 0.3897 MGYWKSKVLPKIKKVFEKNSTKKAAAAAEASKSFDESKEEYNKTFEEKKTELQTKVIEIYEASSTEIKGLVKERNEDGLKKNSTEVHKFLEELVKIDFPGSKAASEASSKFGPALASSSVFFVFEKVSTFIVTEEKEKVEGVEATSAETKTEEETTSVKEREIVVEEEKKEEEEKPQEIETSAEKKVEEEKPDEPAAKEEEKPAEQAEPPKP 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01646 212 PANTHER PLASMA MEMBRANE-ASSOCIATED CATION-BINDING PROTEIN 1 1 212 IPR008469 GO:0046658
Cca08g01646 212 MobiDBLite consensus disorder prediction 135 212 - -
Cca08g01646 212 Pfam DREPP plasma membrane polypeptide 1 211 IPR008469 GO:0046658
Cca08g01646 212 PANTHER PLASMA MEMBRANE-ASSOCIATED CATION-BINDING PROTEIN 1 1 212 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01646 - - gmx:100499895 228.024